| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1681 |
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| Symbol | |
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| ID | 5193923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1921846 |
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| End bp | 1923534 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586151 |
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| Product | cyclic peptide transporter |
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| Protein accession | YP_001267021 |
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| Protein GI | 148546919 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGT CCTTTGATCC GCCTGGAGAA GACTTCCCCA TGATTCGCAA ACCGCTCAGC
GCGACCCGCG AGCTTGCCCA GTTGCTCAAG CCGTTCTGGC CCATCGTGCT GGTTTCCATA
CTGTTGGGCA TCCTCGGCGG CTTCAGCGTC ACCACGCTGC TGGCCACCAT CAACCGCGCC
CTCAACAGCG AAGCAGGGCT GACCCACGCC GTGCTGTGGT TGTTTGCCGG CCTCTGCGTG
CTGACCTTGC TCAGCAGCAT CTTCTCCGAC ATGGGCACCA ATTTCGTTGG CCAGAAGATC
ATTGCCAAAC TGCGCAAGGA GCTGGGCGAA AAAGTGCTTT CGGCGCCCAT TGAGCAGATC
GAGCGCTATC GCAGCCACCG CCTGATACCG GTGCTGACCC ACGATATCGA TACCATCAGC
GATTTCTCGT TCGCCTTCGC CCCCCTGACC ATTTCGCTGA CGGTGACGCT GGGCTGCATG
GGCTACCTGG CAACATTGTC CGGCCCGCTG TTCCTGCTGA TGCTGCTGGC ATTGGGCGCC
GGCATCACCG CCCAGGTCAT CGCCCGCACG CGCGGCATCA AGGGGTTCAA TACCGCCCGC
GAGGCCGAGG ACGACCTGCA GAAGCATTAC AACGCCATTG CCCAGGGCGC CAAGGAGCTG
CGCATACACC GGCCGCGCCG GTATCGCATG TTCACCCGGC ACATCCAGGG GATCAGCGAG
CGGATCAGCG CCATCCAGAT CAAGGCAGTC AACACCTACA TCCTGGCCAA GACGTTCGGC
TCGACGCTGT TCTTCATCGT CATCGGCCTG GCCCTGGCCC TGCAGAGCAC CTGGACAAGC
GTCGATCAGG CGGCAATGAC CGGCTTCGTG CTGGTGCTGC TGTACATGAA AGGCCCACTG
GACCATCTGG TCAGCGTACT GCCGCTGGTC AGCAAGGCAC AGGTGGCATT CCAGCGCATT
GCCGAGCTGT CAGAGCAGTT TTCCTCGCCC GAACCGAACC TGCTGCTCGA CGGCCAAGGC
GCACCGCGCC AGACCATCGA CAGCCTGGAA CTGCACAATG TGCAGTACGC ATTTCCGGCC
GTCGAGGGCA GCACGCCGTT TCGCCTGGGC CCGGTGAACC TCACGATCAA CCAGGGCGAC
ATCGTGTTCA TCGTCGGCGA GAACGGTTGT GGCAAGACCA CGCTGATCAA GCTGCTGCTT
GGCCTGTATG CGCCGCACAG TGGTGACATC CTGCTGGATG GTCAGCCGGT CTCGGTGCTT
GACCGGGATG ACTACCGACA ACTGTTCACC ACCATTTTCG CCGACTACTA CCTGTTCGAC
GACGTGGTCC AGGGCGACCA GCAGATTCCC GACGATGCTA CCCAATACCT GCAACGCCTG
GAGATCGCGC ACAAGGTCAG CGTACGTGAC GGCGCCTTCA CCACCACCGA CCTGTCCACT
GGTCAACGCA AGCGCCTGGC CCTGATCAGC GCCTGGCTGG AGCAGCGCCC GGTACTGGTG
TTCGACGAGT GGGCAGCTGA TCAGGACCCC ACCTTCCGCC GCATCTTCTA CACAGAGCTG
CTGCCGGACC TCAAGCGCCT GGGCAAGACC ATCATTGTCA TCTCCCACGA TGACCGCTAC
TTCGATATTG CCGACCAGCT GGTACACATG GACAGCGGCA AGGTTCGCAC CGCAGCCCAG
CCGGCCTGA
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| Protein sequence | MTTSFDPPGE DFPMIRKPLS ATRELAQLLK PFWPIVLVSI LLGILGGFSV TTLLATINRA
LNSEAGLTHA VLWLFAGLCV LTLLSSIFSD MGTNFVGQKI IAKLRKELGE KVLSAPIEQI
ERYRSHRLIP VLTHDIDTIS DFSFAFAPLT ISLTVTLGCM GYLATLSGPL FLLMLLALGA
GITAQVIART RGIKGFNTAR EAEDDLQKHY NAIAQGAKEL RIHRPRRYRM FTRHIQGISE
RISAIQIKAV NTYILAKTFG STLFFIVIGL ALALQSTWTS VDQAAMTGFV LVLLYMKGPL
DHLVSVLPLV SKAQVAFQRI AELSEQFSSP EPNLLLDGQG APRQTIDSLE LHNVQYAFPA
VEGSTPFRLG PVNLTINQGD IVFIVGENGC GKTTLIKLLL GLYAPHSGDI LLDGQPVSVL
DRDDYRQLFT TIFADYYLFD DVVQGDQQIP DDATQYLQRL EIAHKVSVRD GAFTTTDLST
GQRKRLALIS AWLEQRPVLV FDEWAADQDP TFRRIFYTEL LPDLKRLGKT IIVISHDDRY
FDIADQLVHM DSGKVRTAAQ PA
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