| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1673 |
|---|
| Symbol | |
|---|
| ID | 5190489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1879636 |
|---|
| End bp | 1880832 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640586143 |
|---|
| Product | peptidase |
|---|
| Protein accession | YP_001267013 |
|---|
| Protein GI | 148546911 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAA AGTCACGCTC GAAACTCTGG TTCCTGGTTC ACAGCTGGCT GGCCCTGCCC
ATCTGGTTCT TCGTGCTGAT CGTCTGCTTC ACCGGCACCC TGGCAGTGGT CAGCCAGGAA
CTGGTGTGGC TGGCCAAACC GGAGATACGC GCGGCGAAGC CGAGCGATGA TGCGCCACTG
CTGACTTACG ACCAGGTGCT CAAGGCCCTG CGTGAAGCCC GCCCCGATCT GGATGTGCAA
TACATCATGC GCCCGGACGA GTCGCACTTC GCGCTGCAGG TGCAGGTGGT GCAACCGGAC
AACACCACCC AGAACCTCTA CGTGAACCCC TATACAGGCA AGATCCAGGG CATCAGCCCT
TCCTTCGACT TCCGCCAGTT CACTCGCGCC TTGCATGGCT GGTGGCTGGT ACCTTTCGGC
AACGGCTACC CGTGGGGGTG GTACCTGGTC TCGCTGCTGG GCTTGCCGAT GCTTGCCTCG
CTGGTCACCG GCCTGGTCGT CTACAAGCGC TTCTGGAAAG GCTTTCTGAA ACCTACCCTG
CGCTTTCGCC AAGGTGCGCG CATCTTCTGG GGTGACTTCC ATCGCCTGAG CGGTATCTGG
TCGATCTGGT TCATTGCCGT GATCGCGATC ACCGGCACCT GGTTCCTGAT CCAGGCGTTG
CTGGCCGACA ACCACATCTC GATCTCAAGC CGCGACGTCC CCGCCGTGGT GGCCCGCGAA
GACGTACCGC TGCTGCAGGC TGGCGAAGCG CCCCGGCTGG TCAGCCTGGA GCATGCCATC
GAAACGGTGA AGGCGCAGAT CCCCGGCTTC GAGGCATCCT TCGTGCGCCT GCCCGGCAAT
GCCTATGACA CCTTCAACAT CCGTGGCCGC GGCTGGTACC CGCTGATGTT CCAGAGCGCC
AGCATCAACC CGTACACAGG CGTGGTCGCC ACCTCGCACA CCCTGGATGA TCGCACGTCG
CTGGAGTTCG TCACCGAATC CATGCGCCCG TTGCACACAG GCGACTTCGG CGGGCTGTGG
GTCAAGATGA TCTGGTTCGT TTTTGGCCTG GTGCTGACCT TGATGGTGCT CAGCGGCCTG
TTGATCTGGA GCAAGCGCAC CGCACAGGCC ACTGCAGCCG CACTGAAACG CAAGCCGCGC
AGCGCACCAA CGGCCAACGC CGCGCAAGAC GCCCAACTGC CGGAGACCGC CCGATGA
|
|---|
| Protein sequence | MSKKSRSKLW FLVHSWLALP IWFFVLIVCF TGTLAVVSQE LVWLAKPEIR AAKPSDDAPL
LTYDQVLKAL REARPDLDVQ YIMRPDESHF ALQVQVVQPD NTTQNLYVNP YTGKIQGISP
SFDFRQFTRA LHGWWLVPFG NGYPWGWYLV SLLGLPMLAS LVTGLVVYKR FWKGFLKPTL
RFRQGARIFW GDFHRLSGIW SIWFIAVIAI TGTWFLIQAL LADNHISISS RDVPAVVARE
DVPLLQAGEA PRLVSLEHAI ETVKAQIPGF EASFVRLPGN AYDTFNIRGR GWYPLMFQSA
SINPYTGVVA TSHTLDDRTS LEFVTESMRP LHTGDFGGLW VKMIWFVFGL VLTLMVLSGL
LIWSKRTAQA TAAALKRKPR SAPTANAAQD AQLPETAR
|
|---|
| |