Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1666 |
Symbol | |
ID | 5193035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1871392 |
End bp | 1872615 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586136 |
Product | dihydrolipoamide succinyltransferase |
Protein accession | YP_001267006 |
Protein GI | 148546904 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.41508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCG AGATCAAAGC CCCAACCTTC CCGGAATCGG TTGCCGATGG CACCGTTGCC ACCTGGCACA AGAAGCCGGG CGAAGCCGTC AAGCGTGACG AGCTGATCGT CGACATCGAG ACTGACAAGG TTGTCCTGGA AGTACTGGCG ACTGCCGATG GCGTGCTGGG CGACATCGTC AAGGGCGAGG GCGACACCGT CCTGTCCGAC GAATTGCTGG GTTCGATCGT TGAAGGCGGT GCTGCCGCCG CGCCTGCCGC GGCCGCCGCA CCTGCAGCTG CTCCGGCCGC TGCCAGCGCT GACGCCGGCG AAGATGACCC GATCGCTGCC CCAGCTGCGC GCAAGCTGGC TGAAGAAAAC GGCATCGACC TGGCTACCGT GGCAGGCACC GGTAAAGGCG GTCGCGTCAC CAAGGAAGAC GTGGTTGCTG CTGTTGCCAA CAAGAAGTCG GCTCCTGCCG CTGCACCGGC TGCCAAGCCT GCCGCTGCTG CCGCTGCCCC GGTTGTCGTC GCCGCTGGCG ACCGTACCGA GAAGCGCGTG CCGATGACCC GCCTGCGTGC CAAGATCGCC GAGCGTCTGG TCGAAGCCCA GTCGAACATG GCGATGCTGA CCACCTTCAA CGAAGTGGAC ATGACCGAAG TCATGGCCCT GCGTTCGAAG TACAAGGACC TGTTCGAGAA GACCCACAAT GGCGTGCGCC TGGGCTTCAT GTCGTTCTTC GTCAAGGCTG CCACCGAAGC GCTGAAACGC TTCCCGGCTG TCAACGCCTC GATCGACGGC AACGACATCG TCTACCACGG CTTCGCCGAC GTCGGTGTTG CCGTGTCCAG CGACCGTGGC CTGGTGGTGC CGGTGCTGCG TAACGCCGAG TCGATGAGCC TGGCTGAAAT CGAGAACGGC ATCGCTACCT TCGGCAAGAA GGCCCGTGAC GGCAAACTGT CCATCGAAGA GATGACCGGT GGTACCTTCA CCATCACCAA CGGTGGCACC TTCGGTTCGA TGATGTCGAC CCCGATCGTC AACCCGCCGC AGGCTGCCAT TCTCGGCATG CACAACATCA TCCAGCGCCC GATGGCCATC AATGGCCAGG TCGTGATTCG CCCGATGATG TACCTGGCGC TGTCGTACGA TCACCGCCTG ATCGACGGCA AGGAAGCGGT AACCTTCCTG GTCACTATCA AGAACCTGCT GGAAGATCCG TCTCGCCTGC TGCTGGACAT CTAA
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Protein sequence | MAIEIKAPTF PESVADGTVA TWHKKPGEAV KRDELIVDIE TDKVVLEVLA TADGVLGDIV KGEGDTVLSD ELLGSIVEGG AAAAPAAAAA PAAAPAAASA DAGEDDPIAA PAARKLAEEN GIDLATVAGT GKGGRVTKED VVAAVANKKS APAAAPAAKP AAAAAAPVVV AAGDRTEKRV PMTRLRAKIA ERLVEAQSNM AMLTTFNEVD MTEVMALRSK YKDLFEKTHN GVRLGFMSFF VKAATEALKR FPAVNASIDG NDIVYHGFAD VGVAVSSDRG LVVPVLRNAE SMSLAEIENG IATFGKKARD GKLSIEEMTG GTFTITNGGT FGSMMSTPIV NPPQAAILGM HNIIQRPMAI NGQVVIRPMM YLALSYDHRL IDGKEAVTFL VTIKNLLEDP SRLLLDI
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