Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1665 |
Symbol | sucA |
ID | 5193034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1868518 |
End bp | 1871349 |
Gene Length | 2832 bp |
Protein Length | 943 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640586135 |
Product | 2-oxoglutarate dehydrogenase E1 component |
Protein accession | YP_001267005 |
Protein GI | 148546903 |
COG category | [C] Energy production and conversion |
COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.856909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAA GCGTGATGCA GCGCATGTGG GATAGCGCCC ACCTTTCAGG TGGTAACGCT GCATATGTGG AAGAGCTCTA CGAGCTCTAC CTGCACGACC CTAACGCTGT GCCAGAAGAG TGGCGCACTT ACTTCCAGAA GTTGCCAGCC GACGGCAGCA CCGCTACTGA TGTATCGCAC TCGACAATCC GCGACCATTT CGTACTGCTG GCAAAGAACC AGCGCCGCGC TCAACCGGTT TCCGCCGGGA GCGTGAGCAG TGAACACGAG AAGAAGCAGG TTGAAGTTCT GCGACTGATC CAGGCCTATC GTATGCGCGG CCATCAGGCT GCCAAGCTCG ACCCATTGGG GTTGTGGCAG CGCCCTGCGC CCGTAGACCT GTCGATCAAT CACTACGGCT TGACCAATGC CGATCTTGAT ACGACCTTCC GTGCCGGCGA CCTGTTCATC GGCAAAGAGG AGGCGAGCCT ACGCGACATC TTCGATGCAC TCCAGAAGAC ATATTGTCGC ACCATTGGCG CCGAATTCAC CCACATCGTC GATTCCGAGC AGCGCAGCTG GTTCCAGCAG CGCCTGGAAA GCGTGCGCGG CCGTCCGGAG TTTTCCGCTG ACGTGCAGGC CCACCTGCTC GAGCGCGTGA CCGCCGGTGA GGGCCTGGAA AAGTACCTGG GCACCAAGTA CCCGGGCACC AAGCGTTTCG GCCTTGAAGG CGGCGAGAGC CTGATTCCGA TGCTGGATGA AATGATCCAG CGTTCCGGCT CTTACGGCGC CAAGGAGGTC GTGATCGGCA TGGCCCACCG TGGCCGCCTG AACGTGCTGG TGAACACCTT CGGCAAGAAC CCGCGCGAGC TGTTCGACGA GTTCGAAGGC AAGAAGATGA ACGAGCTGGG CTCCGGTGAC GTGAAGTATC ACCAGGGCTT CTCCTCGAAC GTGATGACCC CGGGTGGCGA AGTGCACCTG GCCATGGCGT TCAACCCGTC CCACCTGGAA ATCGTTTCGC CGGTGGTCGA GGGTTCGGTG CGCGCCCGTC AGGACCGCCG CAACGACACC GTTGGCGACA AGGTGCTGCC GATCTCGATC CACGGCGACG CTGCGTTCGC TGGCCAGGGC GTGGTCATGG AAACCTTCCA GATGTCGCAG ACCCGCGGTT TCAAGACCGG CGGTACCGTG CACATCGTGA TCAACAACCA GGTTGGTTTC ACCATCAGCA ACCCACTGGA TGCGCGCTCC ACCGAGTACG CGACCGACGT TGCCAAGATG ATCCAGGCAC CGATCCTGCA CGTGAACGGC GATGACCCGG AAGCCGTGCT GTTCGTCACC CAGCTGGCCA TCGACTACCG CATGCAGTTC AAGCGTGACG TGGTCATCGA CCTGGTCTGC TACCGTCGCC GTGGCCACAA CGAGGCTGAC GAGCCGAACG GCACCCAGCC GCTGATGTAC CAGCAAATCA GCAAGCAGCG CACTACCCGT GAGCTGTATG CCGAGCAGCT GATCCAGGCC GGTCGCATCG ACGCCGAGCG CGCTCAGGCC AAGATCGACG AGTACCGCAA CGCGCTGGAC AATGGCCTGC ACGTGGTGAA AAGCCTGGTC AAGGAGCCGA ACCGCGAGCT GTTCGTCGAC TGGCGTCCGT ACCTGGGCCA TGCCTGGACC GCGCGTCACG ACACCCGTTT CGACCTCAAG ACCCTGCAGG ATCTGTCGGC CAAGCTGCTC GAGCTGCCGG AAGGTTTCGT GGTCCAGCGT CAGGTGTCGA AGATCTACGA AGACCGTCAG AAGATGCAGG CCGGTGGCTT GCCGATCAAC TGGGGTTATG CAGAGACCAT GGCTTACGCC ACCCTGCAGT TCGAAGGTCA CCCGATCCGC ATGACCGGCC AGGACATCGG CCGTGGCACC TTCTCGCACC GTCACGCGGT GCTGCACAAC CAGAAGGACG CCAGCACCTA CATTCCGTTG CAGAACCTGT TCCCTGGCCA GCCACGTTTC GATCTGTACG ATTCGTTCCT GTCCGAGGAG GCGGTACTGG CCTTCGAATA CGGCTACTCC ACCACCATGC CGAACGCGCT GGTGATCTGG GAAGCCCAGT TCGGCGACTT CGCCAACGGT GCGCAAGTGG TGATCGACCA GTTCATCACC AGTGGTGAGC ACAAGTGGGG CCGCCTGTGT GGCCTGACCA TGCTGCTGCC ACACGGCTAT GAAGGGCAGG GGCCGGAGCA CTCCTCCGCG CGTCTGGAGC GTTACCTGCA GCTGTGCGCC GAGCACAACA TCCAGGTCTG CGTACCGACG ACGCCGGCAC AGATTTACCA CCTGCTGCGT CGCCAGGTCA TTCGCCCGCT GCGCAAGCCG CTGGTCGTCC TGACGCCGAA GTCGCTGCTG CGCCACAAGC TGGCCATCTC GACCCTGGAA GACCTGGCAG AAGGCTCGTT CCAGACCGTG ATCCCGGAAA TCGACGCAAT CGATCCGGCC AAGGTCGAGC GTCTGGTGCT GTGCAGCGGC AAGGTCTACT ACGACCTGCT GGAAAAACGC CGTGCCGAAG GCCGCGAAGA CATCGCCATC CTGCGTATCG AGCAGCTGTA TCCGTTCCCT GAGGACGATC TGGTCGAAAT CCTCGCCCCT TACACCAACC TCAAGCATGC GGTCTGGTGT CAGGAAGAGC CGATGAACCA GGGTGCCTGG TACAGCAGCC AGCACCACAT GCGCCGTATC CTGGGCCGCC ACAACAAGGC ACTGGTCCTG GAATACGCCG GTCGCGACGC TTCTGCCGCG CCAGCCTGTG GTTACGCTTC GAAGCACGCC GAACAGCAGG AAAAACTGCT GCAAGACGCC TTCACTGTCT AA
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Protein sequence | MQESVMQRMW DSAHLSGGNA AYVEELYELY LHDPNAVPEE WRTYFQKLPA DGSTATDVSH STIRDHFVLL AKNQRRAQPV SAGSVSSEHE KKQVEVLRLI QAYRMRGHQA AKLDPLGLWQ RPAPVDLSIN HYGLTNADLD TTFRAGDLFI GKEEASLRDI FDALQKTYCR TIGAEFTHIV DSEQRSWFQQ RLESVRGRPE FSADVQAHLL ERVTAGEGLE KYLGTKYPGT KRFGLEGGES LIPMLDEMIQ RSGSYGAKEV VIGMAHRGRL NVLVNTFGKN PRELFDEFEG KKMNELGSGD VKYHQGFSSN VMTPGGEVHL AMAFNPSHLE IVSPVVEGSV RARQDRRNDT VGDKVLPISI HGDAAFAGQG VVMETFQMSQ TRGFKTGGTV HIVINNQVGF TISNPLDARS TEYATDVAKM IQAPILHVNG DDPEAVLFVT QLAIDYRMQF KRDVVIDLVC YRRRGHNEAD EPNGTQPLMY QQISKQRTTR ELYAEQLIQA GRIDAERAQA KIDEYRNALD NGLHVVKSLV KEPNRELFVD WRPYLGHAWT ARHDTRFDLK TLQDLSAKLL ELPEGFVVQR QVSKIYEDRQ KMQAGGLPIN WGYAETMAYA TLQFEGHPIR MTGQDIGRGT FSHRHAVLHN QKDASTYIPL QNLFPGQPRF DLYDSFLSEE AVLAFEYGYS TTMPNALVIW EAQFGDFANG AQVVIDQFIT SGEHKWGRLC GLTMLLPHGY EGQGPEHSSA RLERYLQLCA EHNIQVCVPT TPAQIYHLLR RQVIRPLRKP LVVLTPKSLL RHKLAISTLE DLAEGSFQTV IPEIDAIDPA KVERLVLCSG KVYYDLLEKR RAEGREDIAI LRIEQLYPFP EDDLVEILAP YTNLKHAVWC QEEPMNQGAW YSSQHHMRRI LGRHNKALVL EYAGRDASAA PACGYASKHA EQQEKLLQDA FTV
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