Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1660 |
Symbol | gltA |
ID | 5193297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1863389 |
End bp | 1864678 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640586130 |
Product | type II citrate synthase |
Protein accession | YP_001267000 |
Protein GI | 148546898 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACA AAAAAGCGCA GTTGGTCATC GAGGGCGCTG CCCCCGTCGA GCTGCCCATT TTAACCGGCA CCGTTGGTCC TGATGTAATC GACGTCCGCG GGTTAGGGGC CACTGGTCAC TTCACCTTCG ACCCAGGTTT CATGGCGACT GCCTCGTGCG AGTCGAAGAT CACCTATATT GACGGCGACA AAGGTATCCT GCTGCACCGC GGCTACCCGA TCGAGCAACT CGCCGAACAG TCCGACTACC TCGAAACCTG CTACCTGCTG CTCAACGGCG AACTGCCGAA TGCCGAGCAA AAGGCCCAGT TCGTCAGCAC CGTGAAGAAC CACACCATGG TTCACGAGCA GTTGAAGTCC TTCTTCAACG GCTTCCGCCG CGACGCTCAC CCGATGGCGG TGATGTGCGG CGTGGTCGGC GCACTGTCGG CGTTCTATCA CGACTCCCTG GACATCAATA ACCCGCAACA CCGCGAAATC TCCGCGGTGC GCCTGGTCGC CAAGATGCCG ACCCTGGCTG CGATGGTTTA CAAGTACTCC ATGGGCCAGC CGATGATGTA TCCGCGCAAC GACCTGTCGT ACGCGGAAAA CTTCCTGCAC ATGATGTTCA ACACCCCGTG CGAGATCAAA CCGATCAGCC CGGTGCTGGC CAAGGCAATG GACCGGATCT TCATCCTCCA CGCCGACCAC GAGCAGAACG CCTCCACCTC CACCGTTCGT CTGGCCGGCT CGTCGGGTGC TAACCCGTTC GCCTGTATCG CCGCCGGTAT CGCCGCACTG TGGGGCCCGG CCCACGGCGG TGCGAACGAA GCCGTACTGA CCATGCTGGA TGAAATCGGC GATGTTTCGA ACATCGACAA ATTCATCGCC AAGGCCAAGG ACAAGAACGA CCCGTTCAAG CTGATGGGCT TCGGTCACCG CGTGTACAAG AACCGCGACC CGCGCGCCAC CGTGATGAAG CAGACCTGCG ACGAAGTCCT GCGCGAGCTG GGCATCAAGA ACGACCCGCA GCTGGAACTG GCCATGCGCC TGGAAGAGAT CGCCCTGACC GATCCTTACT TCATCGAGCG TTCGCTGTAC CCGAACGTCG ACTTCTACTC GGGGATCATC CTCAAGGCGA TCGGCATTCC GACCAGCATG TTCACCGTGA TCTTCGCCCT GGCACGTACC GTGGGCTGGA TCTCGCACTG GAAAGAAATG CTCTCCAGCC CGTACAAGAT CGGCCGTCCG CGCCAGCTGT ACACCGGTGA GCAGAAGCGC GACATCGTTG ACCTGAAAGA CCGCAAGTAA
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Protein sequence | MADKKAQLVI EGAAPVELPI LTGTVGPDVI DVRGLGATGH FTFDPGFMAT ASCESKITYI DGDKGILLHR GYPIEQLAEQ SDYLETCYLL LNGELPNAEQ KAQFVSTVKN HTMVHEQLKS FFNGFRRDAH PMAVMCGVVG ALSAFYHDSL DINNPQHREI SAVRLVAKMP TLAAMVYKYS MGQPMMYPRN DLSYAENFLH MMFNTPCEIK PISPVLAKAM DRIFILHADH EQNASTSTVR LAGSSGANPF ACIAAGIAAL WGPAHGGANE AVLTMLDEIG DVSNIDKFIA KAKDKNDPFK LMGFGHRVYK NRDPRATVMK QTCDEVLREL GIKNDPQLEL AMRLEEIALT DPYFIERSLY PNVDFYSGII LKAIGIPTSM FTVIFALART VGWISHWKEM LSSPYKIGRP RQLYTGEQKR DIVDLKDRK
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