| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1656 |
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| Symbol | |
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| ID | 5194758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1860224 |
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| End bp | 1861753 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640586126 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001266996 |
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| Protein GI | 148546894 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.928604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGAT CTGTCCCAGT ACACTTTGCA ACTGTTACGG TATTCTCTAC CGTCAGTGAC
CCGTACAAGA ATAACGAGCA TGTCGACATG ACCAACCTGC TGCTGTACCA GCGTATCGCC
CAGCAACTGG CCGATGATAT CCGTCGCGGC GTCTACCAGC CAGGCGAGCG GGTACCCTCC
GTGCGCAAGA TGAGCGCCCA GCTCAACGTC AGCCATGCCA CGGTGTTGCA GGCCTATGCC
AATCTTGAGG ACCAAGGGCT TATCCGGGCG CGGCCGCAGT CTGGCTATTA CGTGCACCAG
ACCCCTGCCT TGACCGCGCA AACCCCGGAC ATCGCCCGGG TGGAGCGCCC CGGCCTGGTC
ACGCGCGCCA GCATCATCCA GCAGGTGCTG ACTGAGGCGC GCCGCGATGG TGTGTTCCCG
TTTGGCGCTG CAGTGCCGCA TGTCGACTAC CTGCCAGTGC GCGCCCTGCA TCAGCAAATC
GCCAAGGTGA CGCGCTTCCA CAGCCCGCGC GCCTTCAGCT ACATGTTCAG CCCCGGTTTC
GAGCCGCTGC GCCGACAGAT TGCCATACGC ATGCGCGATG CCGGCGTGCT GGTCGACCCG
CGCGAAGTGA TCGTGACCCA TGGGTGTGTC GATGCCCTGC AGATGTCGCT GCGGGTGCTC
ACCCGTCCAG GTGACCTGAT CGCCGCCGAG TCGCCGACCT ATTACGGCTT GCTGCAGCTG
GCTGACCTGC TGGGTTTGAA AGTGATCGAA ATCCCCAGTG ACCCGTCCAC CGGTATCAGC
CTCGAAGCCT TGCAACTGGC GGCTAACCAA TGGTCGATCA AGGCGCTGGT GCTCACTGCG
CGCTTGAGCA ACCCGCTGGG CGGCACCGTT CCCGAAGAGC GGCAAAAGCA ATTGCTGCGC
CTGGCCTCGG ACTTCGATAT CCAGATCATC GAGGATGACA TCTACGGTGA GCTGATGTTC
GAGCAGGGCA AGACCAAGGC GCTGAAGGCG TTCGACCGGC TGGACCGGGT GATCTACTGT
TCGAGCTTCT CCAAGACCCT GTCCCCTGGG GTGCGGGTGG GCTGGATGAT CGCCGGGCGT
TACCAGGACG AGATTCAGCG CCTGCAGACG TTTACCACCC ACTCGGCCTG TAGCGTGACG
CAGATGGGCG TGGCAGCCTA CCTGGAGAAT GGCGGCTACG ATCGGCATCT GCGCTACATA
CGCCAGGAAT ATCGCAAGAA CCTCAGTGCC TATCAGCTGG CAGTGCAGCA GCACTTCCCC
GAGGGTACCC AGATGACCCG GCCGACAGGC GGCTTCATTC TCTGGGTGAG CCTGCCGGGT
CGGGTCAATA CCCAGGAGCT GCATGTGCGC GCGCTGGAGC AGGGCATCAG CATTGCCCCT
GGACTGATAT TCAGTAACAC AGAGCAGTTC AACCACTGTG TCCGACTCAA CTGCGGCATA
CCTTGGAATA AAGAGGCCGA GCGGGCTGTG ATTACGCTCG GTTTGCTGGC GCAGCAGTTG
TGCAGGGAGA CTGCGGTTAC GCTTTTGTAA
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| Protein sequence | MLRSVPVHFA TVTVFSTVSD PYKNNEHVDM TNLLLYQRIA QQLADDIRRG VYQPGERVPS
VRKMSAQLNV SHATVLQAYA NLEDQGLIRA RPQSGYYVHQ TPALTAQTPD IARVERPGLV
TRASIIQQVL TEARRDGVFP FGAAVPHVDY LPVRALHQQI AKVTRFHSPR AFSYMFSPGF
EPLRRQIAIR MRDAGVLVDP REVIVTHGCV DALQMSLRVL TRPGDLIAAE SPTYYGLLQL
ADLLGLKVIE IPSDPSTGIS LEALQLAANQ WSIKALVLTA RLSNPLGGTV PEERQKQLLR
LASDFDIQII EDDIYGELMF EQGKTKALKA FDRLDRVIYC SSFSKTLSPG VRVGWMIAGR
YQDEIQRLQT FTTHSACSVT QMGVAAYLEN GGYDRHLRYI RQEYRKNLSA YQLAVQQHFP
EGTQMTRPTG GFILWVSLPG RVNTQELHVR ALEQGISIAP GLIFSNTEQF NHCVRLNCGI
PWNKEAERAV ITLGLLAQQL CRETAVTLL
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