Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1639 |
Symbol | |
ID | 5194506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1841901 |
End bp | 1843223 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640586109 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001266979 |
Protein GI | 148546877 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCTTC GGGTACGCCT GAGCCTGATC CTCGGCAGCG CCTTCGTGAT CATCTGGGCG CTGGCCGCGG CGTGGATGCT GCGTGACCTG CGCCAGCAGA TGATGTTTTC CCTCGACCAG CGCCTGGTGG CGTCGGCGCG TATGGTCGCC GGGTTGATCG ACCAGTTGCC GCAGCCGCTG ACTGCCAAGG GCGGGGAGGC GCATTTTTCC GCCGACCAGT TCAGCGTACC GGACGGCATG GCCTGCCAGG TCAGCTCGCT GCGTGGCGAG ATCCTCGCCA GCAACCACAA GCACGATGGC GCCATGGACG ACGAGCGTAG CGGGTTCCGT GACCAGACCA TCGACGATGC GCTTTGGCGC ACCTTTACCT ACAACCACGG CGATGTGCGC ATCACCACGG CCGACCGGCA CATGGAGCGC GAGGCACTGA ACCAGTCGAT TCTCCTGGCG GCATCGGCGC CGGTACTGAT GGCCCTGCTT GGCAGCCTGG GGCTGTTGTG GATCGGCCTT GGCAAGGGCC TGGAGCCGCT CAACCGCATG CGTGATGCGT TGCGCCGCAG GCGTGCGGAC AGTGTCGAGC CGCTGCAGGT GGCGGGCATG CCCAGCGAGT TACAGCCGTT GCTGGAGACC CAGAACCAGC TGTTCCTGCG CATTGCTCAG ACCCTCGAGC GTGAGCGGCG CCTGACCGAC GATGCCGCGC ATGAACTGCG CAGCCCGTTG ACCGCGATCA AGACCCACCT GCAGGTGGCG CGCATGACCG ACGGTGCAGT GCGCGAGCAG GCGCTGGAAC ATGCCGAGCA GGGCACCGAC CGCATGCACC GCACGCTTGA GCAGTTGCTG ATGCTGGCGC GGGTGGAAGG CAGCCTGTCG TTCGAGGATG GCGTGCAGTG CAGCGCCGAG CAGGTGGCGC GGCAGGCGAT GCAGGATGCG GGCGGCGGCG ACAACCGGCG TATCGTGCTG CGTCTGCCTG AGGAGGCTAC GCAAATCTAC CTGGGCATGC CGGCACCGTT GGCGGTGGCA GCACTGCGCA ACCTGCTGGA CAACGCCTTG CGTCATGGCG GTGATGAAGC TGTAGAGCTG GACGTGCAGA TGGCAGACGG CCAAGTGGGC TTCATGGTGC GTGACCATGG GCCAGGGATT GCCGAAGCGG ACCTGGAGCA CCTGACCGAG CGCTTCTGGC GTAATGGGCA AAGTGGTGGT TGCGGGTTGG GGCTGGCGAT AGTGCAGGCG ATCGTGCAGC GGTGTGCCGG TAGCCTGCGC TTTGACAGCC GTAGTGACGG CTTGCGGGTC TTGTTGCGGG TACCGGCGCG TCCGGTGCAT TGA
|
Protein sequence | MSLRVRLSLI LGSAFVIIWA LAAAWMLRDL RQQMMFSLDQ RLVASARMVA GLIDQLPQPL TAKGGEAHFS ADQFSVPDGM ACQVSSLRGE ILASNHKHDG AMDDERSGFR DQTIDDALWR TFTYNHGDVR ITTADRHMER EALNQSILLA ASAPVLMALL GSLGLLWIGL GKGLEPLNRM RDALRRRRAD SVEPLQVAGM PSELQPLLET QNQLFLRIAQ TLERERRLTD DAAHELRSPL TAIKTHLQVA RMTDGAVREQ ALEHAEQGTD RMHRTLEQLL MLARVEGSLS FEDGVQCSAE QVARQAMQDA GGGDNRRIVL RLPEEATQIY LGMPAPLAVA ALRNLLDNAL RHGGDEAVEL DVQMADGQVG FMVRDHGPGI AEADLEHLTE RFWRNGQSGG CGLGLAIVQA IVQRCAGSLR FDSRSDGLRV LLRVPARPVH
|
| |