| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1622 |
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| Symbol | |
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| ID | 5193380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1811289 |
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| End bp | 1812089 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586092 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001266962 |
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| Protein GI | 148546860 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.12881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTCCAG CGCCCGGCCT CAAGGCCTTG TCCACCCTGA TGCTGCTGGC CGTGTTCTGG
TTGGCGGCAC CGGTATGGGC TGGCGAAGCG GTTGAAGTGA AGATTGGCGC AGCCCATTTC
CCGCCTTACA CAGTGCGCCC CGAGCAAGGT GCCGATACCG GTTTGCTGCC GCAGTTGGTC
GATGCACTCA ACCGGGCGCA GCAGCACTAT CACTTCGTTC TGGTACCTAC GTCTATCCAG
CGGCGCTTCG GTGACTTCCA GCAAGGCCGC ACCGACATGG CCATTTTCGA GAACCCACAA
TGGGGCTGGG AGCAGATTGC CCATCAGACC GTGGACATGG GCCTGGAAGA TGCCGAAGTG
TTCGTCGCCC GCAAGGAAAA CGGCAGTGAT CCGCGTTACT TCGACAACCT GCGCGGCAAA
CGCCTGGCCT TGTTCAACGG CTACCACTAC GCGTTCGCCA GCTTCAACGC TGACCCCGAT
TACCTGCGCA AGACATACAA CGCGACCCTG ACCTATTCCC ACGACAGCAA CCTGCTGATG
GTGCAGGCCG GCCGCGCCGA TATCGCCCTG GTCACGCGTT CCTACCTCAG CGATTTCCTG
GCACGCAACC CGGCGAGCAA GGCGCAGCTG GTGCCTTCGC AACGCATTGA CCAGGTCTAT
CACCACTACG CCTTGCTGCG CCCGGGGGCG CCTATCGGCG AGCAGACGTT CGCTGCACTG
CTGCGTGGCC TGCGTGACAG CGGTGAACTG GCGCGGATTT TCGAGCCCTA CCGCATCACA
GTCAGCACGC GCAGGCCTTG A
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| Protein sequence | MTPAPGLKAL STLMLLAVFW LAAPVWAGEA VEVKIGAAHF PPYTVRPEQG ADTGLLPQLV
DALNRAQQHY HFVLVPTSIQ RRFGDFQQGR TDMAIFENPQ WGWEQIAHQT VDMGLEDAEV
FVARKENGSD PRYFDNLRGK RLALFNGYHY AFASFNADPD YLRKTYNATL TYSHDSNLLM
VQAGRADIAL VTRSYLSDFL ARNPASKAQL VPSQRIDQVY HHYALLRPGA PIGEQTFAAL
LRGLRDSGEL ARIFEPYRIT VSTRRP
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