| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1618 |
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| Symbol | |
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| ID | 5190682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1807925 |
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| End bp | 1809349 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586088 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_001266958 |
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| Protein GI | 148546856 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.772604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0588114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAA CCAGCAGTAC CGCCTATAAC TACAAGGTGG TCCGCCAATT CGCCATCATG
ACGGTGGTGT GGGGAATCGT CGGGATGGGG CTCGGCGTCT TCATCGCCGC CCAGCTCGCC
TGGCCGTCCC TCAACTTCGA CCTCCCCTGG ACCAGTTTCG GCCGCCTGCG CCCCCTGCAT
ACCAATGCGG TGATCTTCGC GTTCGGCGGC TGCGCACTGT TCGCCACCTC CTATTATTCG
GTGCAACGCA CCTGCCAGAC CACCCTGTTC GCACCGGGCC TGGCCGCGTT CACGTTCTGG
GGCTGGCAAC TGGTTATCCT GCTGGCGGCC ATCAGCCTGC CGCTGGGCTA CACCAGCTCC
AAGGAATACG CCGAACTGGA ATGGCCGATC GACATTCTGA TCACCATCGT CTGGGTGGGC
TACGCCATCG TGTTCTTTGG CACGCTGATG AAGCGCAACA CCAAACACAT CTACGTCGGC
AACTGGTTCT TCGGCGCCTT CATCCTGACC GTGGCGCTGC TGCACATCGT CAACAACCTG
GAGCTGCCGG TCAGCCTGAC CAAATCCTAT TCGGTCTACG CAGGCGCCAC CGATGCCATG
GTGCAGTGGT GGTACGGCCA TAACGCGGTG GGCTTCTTCC TGACCGCAGG CTTCCTGGGG
ATGATGTACT ACTACGTGCC CAAGCAGGCC GAACGGCCGG TGTATTCGTA TCGCTTGTCG
ATCGTGCACT TCTGGGCGCT GATCACCCTG TACATCTGGG CCGGCCCGCA CCACCTGCAC
TACACCGCCC TGCCCGATTG GGCGCAGTCG CTGGGTATGG TGATGTCGCT GATCCTGCTG
GCGCCAAGCT GGGGCGGCAT GATCAACGGC ATGATGACCC TGTCGGGCGC CTGGCACAAA
CTGCGCAGCG ACCCGATCCT GCGCTTCCTG GTGGTGTCGC TGGCGTTCTA CGGCATGTCC
ACCTTCGAAG GGCCAATGAT GGCCATCAAG ACGGTCAACG CCCTGTCCCA CTACACCGAC
TGGACCATCG GCCACGTCCA CGCCGGCGCC CTCGGCTGGG TAGCGATGAT CTCGATCGGC
GCGCTGTACC ACACCATCCC CAAAGTGTTC GGCAAAGAAC GCATGTACAG CCTCGGCCTG
ATCAATGCGC ACTTCTGGCT GGCCACCATT GGTACCGTAC TGTACATCGC CTCGATGTGG
GTCAACGGCA TCGCCCAGGG CCTGATGTGG CGCGCGGTCA ACAGCGACGG CACGCTCACC
TACTCGTTCG TGGAAACCTT GGTGGCCAGC CACCCAGGCT TCGTCGTGCG CTTCGTCGGC
GGCGCGATCT TCCTCAGCGG CATGTTCCTG ATGGCCTGGA ACACCTGGCG CACCGTGCGT
TCGCCAGCGC TTGACGTCGC CCCTGCGAAC GCCCAGTTGG CTTGA
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| Protein sequence | MNTTSSTAYN YKVVRQFAIM TVVWGIVGMG LGVFIAAQLA WPSLNFDLPW TSFGRLRPLH
TNAVIFAFGG CALFATSYYS VQRTCQTTLF APGLAAFTFW GWQLVILLAA ISLPLGYTSS
KEYAELEWPI DILITIVWVG YAIVFFGTLM KRNTKHIYVG NWFFGAFILT VALLHIVNNL
ELPVSLTKSY SVYAGATDAM VQWWYGHNAV GFFLTAGFLG MMYYYVPKQA ERPVYSYRLS
IVHFWALITL YIWAGPHHLH YTALPDWAQS LGMVMSLILL APSWGGMING MMTLSGAWHK
LRSDPILRFL VVSLAFYGMS TFEGPMMAIK TVNALSHYTD WTIGHVHAGA LGWVAMISIG
ALYHTIPKVF GKERMYSLGL INAHFWLATI GTVLYIASMW VNGIAQGLMW RAVNSDGTLT
YSFVETLVAS HPGFVVRFVG GAIFLSGMFL MAWNTWRTVR SPALDVAPAN AQLA
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