Gene Pput_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1616 
Symbol 
ID5193523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1807103 
End bp1807297 
Gene Length195 bp 
Protein Length64 aa 
Translation table11 
GC content63% 
IMG OID640586086 
Productcytochrome c oxidase, cbb3-type, CcoQ subunit 
Protein accessionYP_001266956 
Protein GI148546854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0826042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0408065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGG ACATCGGCAT GATCCGCGGT GTGGGCACCC TGGTGGTGAT GATTGCCTTT 
ATCGGCCTCA CCCTGTGGGT CTTCAACCGC CGCCGCGACC GTGATTTCGC CGAAGCGCGC
CTGCTGCCCT TCGTCGACGA CCGCCTGCCC CCTGCCGGGC AGGAGCCTGC TGCAAAAAGG
AGTAACGGGC AATGA
 
Protein sequence
MEMDIGMIRG VGTLVVMIAF IGLTLWVFNR RRDRDFAEAR LLPFVDDRLP PAGQEPAAKR 
SNGQ