| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1612 |
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| Symbol | |
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| ID | 5192109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1803528 |
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| End bp | 1804136 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586082 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_001266952 |
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| Protein GI | 148546850 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00163772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00565404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGCATG AAGCCGTCGA GAAGAACATA GGCCTGCTGG CCTTCTTCAT GGTCATCGCC
GTGAGCGTCG GTGGCCTGAC CCAGATCGTC CCGCTGTTTT TCCAGGACGT CACCAACAAG
CCGGTCGAGG GCATGAAGCC GCGCACCGCG CTGGAGCTGG AAGGCCGCGA TATCTACATC
CGCGAAGGCT GCGTAGGCTG CCACTCGCAG ATGATCCGCC CGTTCCGTGC CGAAACCGAG
CGGTACGGCC ATTACTCGGT AGCCGGTGAA AGCGTGTGGG ATCACCCGTT CCTGTGGGGC
TCCAAGCGTA CCGGGCCGGA CCTGGCCCGC GTCGGCGGCC GCTACTCCGA TGACTGGCAC
CGTGCGCACC TGTACAACCC GCGCAACGTG GTACCGGAAT CGAAGATGCC GTCCTACCCG
TGGCTGGTCG AGAACAAGCT CGACGGCAAA GACACCGCGA AGAAGATGGA AGTGCTGCGC
ACACTCGGCA CCCCGTACAC CGACGCCGAC ATTGCCGGCG CACGTGACGC GGTCAAGGGC
AAGACCGAAA TGGACGCCAT CGTCGCGTAC CTGCAGGGTC TTGGCACCAT CATCAAGAGC
AAACGGTGA
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| Protein sequence | MKHEAVEKNI GLLAFFMVIA VSVGGLTQIV PLFFQDVTNK PVEGMKPRTA LELEGRDIYI
REGCVGCHSQ MIRPFRAETE RYGHYSVAGE SVWDHPFLWG SKRTGPDLAR VGGRYSDDWH
RAHLYNPRNV VPESKMPSYP WLVENKLDGK DTAKKMEVLR TLGTPYTDAD IAGARDAVKG
KTEMDAIVAY LQGLGTIIKS KR
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