| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1611 |
|---|
| Symbol | |
|---|
| ID | 5192108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1803331 |
|---|
| End bp | 1803522 |
|---|
| Gene Length | 192 bp |
|---|
| Protein Length | 63 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640586081 |
|---|
| Product | Cbb3-type cytochrome oxidase component |
|---|
| Protein accession | YP_001266951 |
|---|
| Protein GI | 148546849 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4736] Cbb3-type cytochrome oxidase, subunit 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00500182 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0106574 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCG GGATGATTCG CGGCCTGGGC ACCGTCGTGG TGATGGTGGC CTTCGTGGGC
CTGGCGCTGT GGGTGTTCAA CCCACGGCGT AAAAAGGACT TCGACGAAGC GACCCAACTG
CCCTTCGCGG ATGACCCCGA GGCCACTCGG CACGTCGAGC AAGCAAAAGC TTCTGGGAGC
AAACAACAAT GA
|
|---|
| Protein sequence | MDIGMIRGLG TVVVMVAFVG LALWVFNPRR KKDFDEATQL PFADDPEATR HVEQAKASGS
KQQ
|
|---|
| |