| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1600 |
|---|
| Symbol | |
|---|
| ID | 5194227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1792253 |
|---|
| End bp | 1792588 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640586070 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001266940 |
|---|
| Protein GI | 148546838 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0718] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00103] DNA-binding protein, YbaB/EbfC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.599296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.129358 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAG GTGGCATGGC CGGCCTGATG AAGCAGGCCC AGCAGATGCA GGAAAAAATG
CAGAAGATGC AGGAAGAACT GGCCAACGCC GAAGTCACCG GTCAGTCCGG TGGCGGTCTG
GTGAGCGTGG TGATGACCGG TCGTCACGAC GTCAAGCGCG TCAGCATCGA CCAGAGCCTG
ATGTCGACTG ATGAAGACGA CAAGGAAGTT CTGGAGGACC TCATTGCCGC TGCGCTGAAC
GACGCCGTGC GCAAGGTTGA GCAAAGCAGC CAGGAAAAGA TGGGCGGCAT GACCGCCGGC
ATGCAACTGC CGCCAGGCTT CAAGATGCCG TTCTAA
|
|---|
| Protein sequence | MMKGGMAGLM KQAQQMQEKM QKMQEELANA EVTGQSGGGL VSVVMTGRHD VKRVSIDQSL
MSTDEDDKEV LEDLIAAALN DAVRKVEQSS QEKMGGMTAG MQLPPGFKMP F
|
|---|
| |