| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1598 |
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| Symbol | |
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| ID | 5193455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1789183 |
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| End bp | 1789989 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640586068 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001266938 |
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| Protein GI | 148546836 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.640596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.10056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGAAGAC TGCTGGCCCT GTTACTGCTG TGGTCTACAA ACAGCCTGGC TGACCAGCCG
GTGCTGCGCT TCTCCGTAGC CGAGAGCTGG AGCATGCCCC TGGTACGCAT CGAAGGCGAT
CAGCCAGTGG AGGGATTGCT TTACGACCTG ATGCAAGCCG TTGCCAGGCA AGTGGGCGCT
CGCCCCGAGT TCCACGTCAT GGCCCGCTTG CGCCTGGAGG AGGCCATGAG CAGCGGCGAT
ATTGATGTCC GTTGCTACGT CAGTACCCAA TGGCTCAACG ACCGCCCAAG GGATTTTGTG
TGGAGTATCC CGCTGATTCA TCAGCGTGAC GTACTGGTCG GCCGCGCCAG CGACAGCACA
CCGATCCCCC CTGAGCAGCT GCCACCTCAG GCGATCGGCA CGGTACTGGG CTACACCTAT
TCAACCCTGC AACCACTGCT GGACCACGGC CAGTTGCACC GTGAGGACAG CCGCAACCAG
TTGCTGGTAC TGCAAAAGCT GCAGGCCGGC CGGTATCGCC ATGCGGTGAG CAACCAGTTG
TCGTTGCAGT GGTTCAACCA AGGGTTGCCA GCGGAGCAGC AATTGCAAGC GCTGGCGGTG
CTGGACGAAC AGGATTTGGG GTGCATGGTG CGCAACGATC CGGCGATACC GACACAAGGG
CTGTTGCGGG CGTTGGTAAG GATGAAGCAG TCGGGGGAGA TCGAGCGGAT TTTGCAGCGG
TATGGAGGGA CGGGCGACCC GGACAGTATG TCTGTGGCCC GGCCCGAAAT ACCCAGCAAA
ATGCCGGCAC ACAGCCAGCG CAACTAA
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| Protein sequence | MRRLLALLLL WSTNSLADQP VLRFSVAESW SMPLVRIEGD QPVEGLLYDL MQAVARQVGA
RPEFHVMARL RLEEAMSSGD IDVRCYVSTQ WLNDRPRDFV WSIPLIHQRD VLVGRASDST
PIPPEQLPPQ AIGTVLGYTY STLQPLLDHG QLHREDSRNQ LLVLQKLQAG RYRHAVSNQL
SLQWFNQGLP AEQQLQALAV LDEQDLGCMV RNDPAIPTQG LLRALVRMKQ SGEIERILQR
YGGTGDPDSM SVARPEIPSK MPAHSQRN
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