Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1591 |
Symbol | |
ID | 5194027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1778654 |
End bp | 1779313 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586060 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001266931 |
Protein GI | 148546829 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.355818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCA AGGCCCCGGA CAGCCTCTCC GAGCAGATTG CCGATTACCT GGCCGAACGC ATCATCCGCG GCGAGCTGGC GCCGGGCGAA CGTATCCAGG AGCAGAAGGT TACCCAGGCG CTCAACGTCA GCCGCGGCTC GGTGCGCGAA GCACTGCTGA TCCTCGAACG CCGCCATCTG GTGGCGATCC TGCCGCGACG TGGTGCCCAT GTCACCGAAC TGGACGAACG CAGCGTTCGT AGCCTGTGCT CGCTGATGGG CGAGTTCTAC ATCCTGCTGG GCAACGCGGT TGCGCAAAAA TGGCGCACCG AAGCCGACCT GCGCCCGTTT CTGGAGATCC AGCAGCGGCT GCAGCGTGCC CATGACCAGC TCGATATCAA GACCTTCGTC GCCGACAGTT TTGCGGTCAT GCGTGCGGCC TATCCGTTCG CCGACAACCC GTTCCTGCAG GAAACCGTGG AAAACCTGCA GCCGGCCATG AGCCGTGCCT ATTACCTGTC GCTGGACCAG CGCCAGGCCA ACATGATCGA CTATCTCGAC CTGTTCGCCC GCCTGCTCGA AGCCGTGGTC TCCCGCGACC TGCCGCGCAT TCGCGAGGTG CTCACCGCCT ATGGCCAGCG CAGCTGCGAA CTGGTGCTGG CGGCACTGGC CAGAGGCTGA
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Protein sequence | MTFKAPDSLS EQIADYLAER IIRGELAPGE RIQEQKVTQA LNVSRGSVRE ALLILERRHL VAILPRRGAH VTELDERSVR SLCSLMGEFY ILLGNAVAQK WRTEADLRPF LEIQQRLQRA HDQLDIKTFV ADSFAVMRAA YPFADNPFLQ ETVENLQPAM SRAYYLSLDQ RQANMIDYLD LFARLLEAVV SRDLPRIREV LTAYGQRSCE LVLAALARG
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