Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1587 |
Symbol | |
ID | 5193584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1772206 |
End bp | 1773510 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586056 |
Product | guanine deaminase |
Protein accession | YP_001266927 |
Protein GI | 148546825 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | [TIGR02967] guanine deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTTA CCCGCAAAGC CTACCGTGCC GCCATCCTGC ACAGCATTGC CGACCCGGCC GAGGTGGGCC TGGAGGCTTC CCATGAATAC TACGAAGACG GCCTGCTGGT GGTCGACGAT GGCCGCATCA GCGCCGTTGG GCACGCCAGT GAACTGCTGC CGACGCTGGA TGCCGGCATC CCGGTCGAGC ACTACCAGGA CGCGCTGATC ACCCCGGGCT TCATCGATAC CCACATCCAC TTCCCGCAGA CCGGCATGAT CGGCTCGTAC GGCGAGCAGT TGCTGGACTG GCTGAACACC TACACCTTCC CGTGCGAAAA GCAGTTCGCC GACAAAGGCC ACGCCGACCA GGTGGCGAAG ATCTTCCTCA AGGAACTGCT GCGCAACGGC ACCACCACTG CGCTGGTATT CGGCAGCGTG CACCCGGAAT CGGTCAACGC CCTGTTCGAA GAGGCCGAGC GCCTGGACCT GCGCCTGATC GCCGGCAAAG TGATGATGGA CCGCAATGCC CCAGACTACC TGACCGACAC CGCCGAGTCC GGCTATGCCG AAAGCAAGGC ACTGATCGAG CGCTGGCACG GCAAAGGCCG CCTGCACTAT GCAGTGACCC CGCGTTTCGC CCCGACCAGC ACGCCGCAAC AGTTGACCCT GGCCGGCCAA TTGCTCAAGG AGCACCCGGG CGTGTACATG CACACGCACC TGTCGGAAAA CCTCAAGGAA ATCGACTGGG TCAAGTCGCT GTTCCCTGAG CAAAAGGGTT ATCTGGACGT CTACGATCAC TTCGAGCTGC TGGGCGAGCG CTCGGTGTTC GCCCACGGCG TGCACCTGTG CGACGACGAG TGCCAGCGCC TGGCAGAAAC CGGCTCGGCC GTGGCCTTCT GCCCCACCTC CAACCTGTTC CTCGGCAGCG GCCTGTTCAA CCTGCCCCAG GCCGAGCGGT TCAAGGTCAA CGTGGGCCTG GGTACCGACG TTGGCGCCGG CACCAGCTTC TCTCTGCTCA ACACCCTGAA CGAGGCATAC AAGGTGATGC AGCTGCAAGG CGCGCGCCTG CACCCGTACA AATCGCTGTA CCTGGCCACC CTCGGCGGCG CTCGCGCGCT ACGCCTGGAC GACCGTATCG GCAGCCTGCG CCCGGGTAAC GATGCCGACT TCGTGGTGCT GGACTACAAG GCCACGCCAC TGCTGGACTA TCGCATCCAG CAGTCCAACA GCATCGAAGA AACCTTGTTC GTGCTCACCA CCCTGGGCGA TGACCGTACC GTGCGTGAAA CCTACGCCGC CGGGCGCTGC GTGCACCAGC GCTAA
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Protein sequence | MTVTRKAYRA AILHSIADPA EVGLEASHEY YEDGLLVVDD GRISAVGHAS ELLPTLDAGI PVEHYQDALI TPGFIDTHIH FPQTGMIGSY GEQLLDWLNT YTFPCEKQFA DKGHADQVAK IFLKELLRNG TTTALVFGSV HPESVNALFE EAERLDLRLI AGKVMMDRNA PDYLTDTAES GYAESKALIE RWHGKGRLHY AVTPRFAPTS TPQQLTLAGQ LLKEHPGVYM HTHLSENLKE IDWVKSLFPE QKGYLDVYDH FELLGERSVF AHGVHLCDDE CQRLAETGSA VAFCPTSNLF LGSGLFNLPQ AERFKVNVGL GTDVGAGTSF SLLNTLNEAY KVMQLQGARL HPYKSLYLAT LGGARALRLD DRIGSLRPGN DADFVVLDYK ATPLLDYRIQ QSNSIEETLF VLTTLGDDRT VRETYAAGRC VHQR
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