Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1586 |
Symbol | |
ID | 5194380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1771511 |
End bp | 1772209 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586055 |
Product | aquaporin Z |
Protein accession | YP_001266926 |
Protein GI | 148546824 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGT CCCTCGGTAA ACGCATGGGT GCCGAACTGA TCGGCACCTT CTGGCTGGTC CTTGGTGGCT GTGGCAGTGC GGTACTCGCA GCCAGTTCCC CCGTCGGCAT CGGTGTGCTC GGTGTCGCCT TCGCCTTCGG CCTCACCGTA CTGACCATGG CCTTTGCCAT CGGCCATATC TCGGGTTGCC ATCTAAACCC TGCCGTGTCG TTCGGGCTGG TGGTCGGCGG GCGCTTCCCG GCCAAAGAGC TGCTGCCTTA TGTGATCGCC CAGGTGATCG GTGCCATCCT GGCGGCCGGG GTGATCTACC TCATCGCCAG CGGCAAGGCC GGGTTCGAGC TGTCTTCGGG GTTGGCTTCA AACGGCTACG CCGACCATTC GCCCGGTGGC TATACGCTGG GTGCGGGTTT TGTCAGTGAA GTGGTGATGA CGGCGATGTT CCTGGTGGTC ATCATGGGGG CGACCGACGC CCGCGCACCG GCAGGTTTTG CACCGATCGC CATCGGCCTG GCCCTAACCC TGATCCACCT GATCTCGATC CCGGTGACCA ATACCTCGGT CAACCCCGCG CGTAGCACGG GGCCGGCCTT GTTCGTCGGT GGCTGGGCCC TGCAGCAGCT GTGGCTGTTC TGGGTGGCGC CGCTGATCGG TGCTGCAATC GGCGGCGCGC TGTATCGGGG CCTGGCGAAA GAACCTTAG
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Protein sequence | MSMSLGKRMG AELIGTFWLV LGGCGSAVLA ASSPVGIGVL GVAFAFGLTV LTMAFAIGHI SGCHLNPAVS FGLVVGGRFP AKELLPYVIA QVIGAILAAG VIYLIASGKA GFELSSGLAS NGYADHSPGG YTLGAGFVSE VVMTAMFLVV IMGATDARAP AGFAPIAIGL ALTLIHLISI PVTNTSVNPA RSTGPALFVG GWALQQLWLF WVAPLIGAAI GGALYRGLAK EP
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