Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1585 |
Symbol | |
ID | 5194379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1770570 |
End bp | 1771361 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640586054 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001266925 |
Protein GI | 148546823 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.640337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCCAT ACTTTCTCTT CGTGCCTCGA GAGCCCATGA ACGAACAGCT GCAACCTCTG AAAAAACCTG CACGAGTCGG CAAGGCCGGC CGCAGCGGTA CCCAGGACGA CATCGTCTAC GCGCATATTT TCGAGGCGAT CCTCGAGCAG CGTCTGGCTC CGGGCACCAA GTTGAGCGAG GAAGCGCTGG GCGAGATCTT TGGCGTCAGC CGCACCATCA TCCGCCGCGC CTTGTCGCGC CTGGCCCACG AAAGCGTGGT GCTGCTGCGG CCGAACCGCG GCGCGGTGGT GGCCAGCCCG ACTGTAGAAG AGGCGCGCCA GGTGTTCTTC TCACGGCGCA TGGTCGAACG CGCCATCACC GAGCTGGCGG TGCAGCATGC CACCCCCGAT CAGCTCAACG AGCTGCGGCA GATGGTGCGT GAGGAGCGCG ACAGCTTTTC GCGCGGTGAC CGGGGTGCCG GCATTCGCCT GTCCGGTGAG TTCCACCTCA AGCTGGCCGA AGCGGCGGGC AATGCACCGC TGGTAAGTTT CCAGCGCAGC CTGGTATCGC AGACTTCGCT GATCATTGCC CAGTACGAAA GCGGCAACCG CTCGCACTGC TCTTACGATG AGCACATGCA GCTCATCGAT GCCATCGAGG CGCGCGATGC CGAGCAGGCC GTGAGCCTGA TGATGCATCA CATGGACCAC ATCGACAGCA AGCTGAACCT GGACGAGGAG AGCGCCTCGG ACGATTTGCA TGCGGTGTTC TCGCATTTGC TGAAAAAGCC CAAGGTTTCC GTCAAGGGTT GA
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Protein sequence | MAPYFLFVPR EPMNEQLQPL KKPARVGKAG RSGTQDDIVY AHIFEAILEQ RLAPGTKLSE EALGEIFGVS RTIIRRALSR LAHESVVLLR PNRGAVVASP TVEEARQVFF SRRMVERAIT ELAVQHATPD QLNELRQMVR EERDSFSRGD RGAGIRLSGE FHLKLAEAAG NAPLVSFQRS LVSQTSLIIA QYESGNRSHC SYDEHMQLID AIEARDAEQA VSLMMHHMDH IDSKLNLDEE SASDDLHAVF SHLLKKPKVS VKG
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