Gene Pput_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1584 
Symbol 
ID5194404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1768973 
End bp1770322 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content62% 
IMG OID640586053 
Productxanthine/uracil/vitamin C permease 
Protein accessionYP_001266924 
Protein GI148546822 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAGCC GCAAATCCGA AGCCCCTACG CTGGATCTCG CCCCGCCGCT CGAAACGAGC 
TGGCTGGAGC GGATTTTCAA ACTCAAGCAA CACGGCAGCA CTGTCAAAAC CGAAATGATC
GCTGGGGTGA CCACCTTCAT CACCATGGCC TACATCATCT TCGTCAACCC CAACATCATG
GCCGACGCCG GCATCGACCA TGGTGCCGCT TTTGTCGCCA CCTGCATCGC CGCCGCGCTG
GGCTGCCTGC TGATGGGCCT GTACGCCAAC TGGCCGGTGG GCCTGGCGCC GGGCATGGGG
CTCAATGCTT TCTTTACCTA CACCGTGGTC GGCACCATGG GCTACAACTG GGAAACGGCG
CTGGGGGCGG TATTCGTCTC CGGCGTGTTG TTCATGTTCC TGACCTTGTC GAAAGTGCGC
GAATGGCTGC TCAACAGCAT CCCGGTCAGC CTGCGCCATG CCATGGGGGC CGGCGTCGGA
TTGTTTCTCG GGCTGATCGG CCTGAAGACC GCAGGCATCA TCGTCGACAG CCCCGCCACC
CTGATCAAGC TGGGCTCGTT GCATGAGCCG GGGCCGCTGC TGGCGGCCGT GTGCTTCCTG
CTGATCGCCA TCCTGAGCTA CAAGCGGGTA TTCGGCGCGA TCCTGATCAG CATCATTGGT
GTCACCCTGG CGGGCTGGGG CCTGGGCCTG GTCAAGTTTG GCGGGGTGAT GTCGATGCCC
CCAAGCCTGG CACCGACCTG GATGGCCATG GACGTGGCTG GCGTGTTCAA TGTCAGCATG
ATCAGCGTGG TGCTGGCGTT CCTGTTCGTG CACATGTTCG ACACTGCCGG CACGCTGATG
GGGGTTGCCC AGCGAGCGAA CCTGGTAGCG CCGGACGGGC GTATCGAAGG CCTGTCACGC
GCCTTGAAGG CCGACAGTGC TTCCAGCGTA TTCGGTGCTG TGGTCGGCGT GCCCCCAGTG
ACCAGTTATG TGGAGAGTGC CGCAGGTGTC GCCGCAGGTG GCCGTACCGG TTTGACGGCG
GTGGTGGTCG GCTTGCTGTT CGTCGCAGCG ATGTTCTTCG CCCCGCTGGC GGGGATGATC
CCGGCCTACG CGACAGCAGG CGCACTGATC TACGTGGCAA TGCTGATGAT GGGCAGCATG
GCGCACATCC ATTGGGACGA AGCCACCGAC AGCATTCCGG CGATTGTCAC GGTCATCATG
ATGCCGCTGA CCTTCTCCGT TGCCGATGGT ATCGCGCTGG GTTTCATCAC CTACGTCGCG
TTGAAGGCAG GTACCGGCAA GTACAAGGAA ATCTCGGCCA GCCTGTGGGT ACTGTGCGCA
ATCTTCATTG CCAAGTTCGT GTTCCTCTGA
 
Protein sequence
MESRKSEAPT LDLAPPLETS WLERIFKLKQ HGSTVKTEMI AGVTTFITMA YIIFVNPNIM 
ADAGIDHGAA FVATCIAAAL GCLLMGLYAN WPVGLAPGMG LNAFFTYTVV GTMGYNWETA
LGAVFVSGVL FMFLTLSKVR EWLLNSIPVS LRHAMGAGVG LFLGLIGLKT AGIIVDSPAT
LIKLGSLHEP GPLLAAVCFL LIAILSYKRV FGAILISIIG VTLAGWGLGL VKFGGVMSMP
PSLAPTWMAM DVAGVFNVSM ISVVLAFLFV HMFDTAGTLM GVAQRANLVA PDGRIEGLSR
ALKADSASSV FGAVVGVPPV TSYVESAAGV AAGGRTGLTA VVVGLLFVAA MFFAPLAGMI
PAYATAGALI YVAMLMMGSM AHIHWDEATD SIPAIVTVIM MPLTFSVADG IALGFITYVA
LKAGTGKYKE ISASLWVLCA IFIAKFVFL