Gene Pput_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1583 
Symbol 
ID5194403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1768311 
End bp1768664 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content62% 
IMG OID640586052 
Producthydroxyisourate hydrolase 
Protein accessionYP_001266923 
Protein GI148546821 
COG category[R] General function prediction only 
COG ID[COG2351] Transthyretin-like protein 
TIGRFAM ID[TIGR02962] hydroxyisourate hydrolase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.619574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGTT TGACCACACA CGTACTGGAT GCCGCGCATG GCTGCCCGGG TAGCTCGATC 
AAGGTCGAGC TGTACCGCGT CGAAGGCCAG CAGCTGGAGC TGGTGAACAC CGCCCTGACC
AACAGCGATG GCCGCGTAGA CGCGCCGCTG TTGCAGGGGG ACGATTACCG CACTGGCGTT
TACCAGTTGC AGTTCAGCGC TGGGGATTAC TACCGCGCCC GTGGCGTGCA ATTGCCGGCC
CAGGCGTTTC TGGATGTTGT CGTGCTGCGC TTTGGCATCG ACGAGTCGCA GGAGCACTAC
CACGTGCCGC TGCTGATTTC GCCGTACAGC TATTCGACCT ATCGTGGAAG CTAG
 
Protein sequence
MGRLTTHVLD AAHGCPGSSI KVELYRVEGQ QLELVNTALT NSDGRVDAPL LQGDDYRTGV 
YQLQFSAGDY YRARGVQLPA QAFLDVVVLR FGIDESQEHY HVPLLISPYS YSTYRGS