| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1582 |
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| Symbol | |
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| ID | 5192670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1766985 |
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| End bp | 1767911 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586051 |
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| Product | chitin deacetylase |
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| Protein accession | YP_001266922 |
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| Protein GI | 148546820 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.297708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCTG ATTACCCTCG CGACCTGATC GGTTACGGCA ACAACCCTCC TCACCCGCAA
TGGCCGGGTA ACGCCCGCAT CGCGCTGTCT TTCGTCCTCA ATTACGAGGA AGGTGGCGAA
CGCAACATCC TGCACGGTGA CAAGGAATCC GAAGCCTTCC TGTCCGAGAT GGTCGCTGCC
CAACCCCTGC AGGGCCAGCG CAACATGAGC ATGGAGTCGC TGTATGAATA CGGCAGCCGT
GCCGGTGTAT GGCGCCTGCT GAAGCTGTTC AAGGACAGCG GCGTGCCACT CACCATCTTC
GCCGTGGCCA TGGCCGCCCA GCGCCACCCC GACGTGATCC GCGCCATGGT CGAAGCCGGC
CACGAGATCT GCAGCCACGG CTACCGCTGG ATCGACTACC AGAACATGGA TGAGGCCCAG
GAGCGCGAGC ACATGCTCGA AGCCATCCGT ATCCTCACCG AACTCACCGG CGAGCGCCCG
CTGGGCTGGT ACACCGGCCG TACCGGCCCG AACACCCGCC GCCTGGTGAT GGAGGAAGGT
GGCTTCCTCT ATGACAGCGA CACCTACGAC GACGACCTGC CCTACTGGGA GCCGAACAAC
CCCACCGGCA AGCCGCACCT GGTGATCCCC TACACCCTGG ACACCAACGA CATGCGCTTC
ACCCAGGTAC AGGGCTTCAA CTGCGGCGAG CAGTTCTTCC AGTACCTGAA AGACGCCTTT
GATGTGCTGT ACGCCGAAGG CGCCGAAGCA CCGAAAATGC TTTCCATCGG CCTGCACTGC
CGCCTGGTCG GCCGCCCGGC ACGTCTGGCT GCACTGAAGC GCTTCGTCGA TTACGCAAAA
AGTCATGACC AGGTCTGGTT CGCCCGTCGC GTGGATATCG CCCGCCACTG GCACGCCACC
CACCCGTACA AGAAAGAGAA CGCCTGA
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| Protein sequence | MSADYPRDLI GYGNNPPHPQ WPGNARIALS FVLNYEEGGE RNILHGDKES EAFLSEMVAA
QPLQGQRNMS MESLYEYGSR AGVWRLLKLF KDSGVPLTIF AVAMAAQRHP DVIRAMVEAG
HEICSHGYRW IDYQNMDEAQ EREHMLEAIR ILTELTGERP LGWYTGRTGP NTRRLVMEEG
GFLYDSDTYD DDLPYWEPNN PTGKPHLVIP YTLDTNDMRF TQVQGFNCGE QFFQYLKDAF
DVLYAEGAEA PKMLSIGLHC RLVGRPARLA ALKRFVDYAK SHDQVWFARR VDIARHWHAT
HPYKKENA
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