| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1581 |
|---|
| Symbol | |
|---|
| ID | 5192669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1766470 |
|---|
| End bp | 1766985 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640586050 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001266921 |
|---|
| Protein GI | 148546819 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3195] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03164] OHCU decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.288278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCT TCAATACCCT CAAACCCTCC ACCCTGGACC GCGACGCCTT CGTCAAGGCC
TTCGCCGACA TCTACGAGCA CTCGCCGTGG GTTGCCGAAA AAGCCTATGA CCTGGGCCAA
CTGGGCGAGC TGGACGAGAT CGAGGCGCTG CACCAGCGCA TGAGCGACAT CCTGCTCAGC
GCCAACCACG CTGACCAGCT GGCGCTGATC AATGCTCACC CGGACCTGGC AGGCAAGGCC
GCCATCCAGG GCGAGCTGAC CGAATCGAGC ACCAACGAAC AGGCCGGTGC CGGTATCCAC
CAGTGCACCG CCGAAGAGTT CGCCCGGTTC ACCGAACTGA ACGATGCCTA TAAAGCCAAG
TTTCAGTTCC CGTTCATCAT GGCGGTGAAG GGCAGTAACC GGCACCAGAT TCTCGCCGCC
TTTGAAAAAC GCATCCACAA CGATGCCGAT GCCGAATTCA AGGAAGCCCT GGCGCAGATC
AACCTGATCG CCCTGTTCCG CCTGCTGCAG CTGTAA
|
|---|
| Protein sequence | MTAFNTLKPS TLDRDAFVKA FADIYEHSPW VAEKAYDLGQ LGELDEIEAL HQRMSDILLS
ANHADQLALI NAHPDLAGKA AIQGELTESS TNEQAGAGIH QCTAEEFARF TELNDAYKAK
FQFPFIMAVK GSNRHQILAA FEKRIHNDAD AEFKEALAQI NLIALFRLLQ L
|
|---|
| |