| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1573 |
|---|
| Symbol | |
|---|
| ID | 5194422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1758537 |
|---|
| End bp | 1758977 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640586042 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001266913 |
|---|
| Protein GI | 148546811 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0241263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTTC TGAACCTGAA AATCGCCGTC AGCCTGGTGA ATGCCGCGCT GGTGGCGGGC
CGCAAGATCA ATGCCGCGCC ACTGACCGTG GCGGTGCTGG ATGCCGGCGG GCACCTGCTG
GCGCTGCAGC GCGAGGATGG CGCGAGCTTG ATTCGTCCTG AAGTGGCCAC TGGCAAAGCC
TGGGGGGCGA TTGCCCTGGG CAAGGGGTCG CGCTTGCTGG CGCTGGATGC GCAGCAGCGG
CCGGCTTTTT TTGCCGCGTT GAACGGGATG GGTGAGCGGC CGGTGGTGCC GGCGCCGGGT
GGGGTGCTGA TTCGTGATCA GGACGGCAAG GTGCTGGGTG CCGTGGGGAT CAGCGGCGAT
ACGTCGGATA TCGACGAGCA GTGTGCGATC AGTGCGATCG AGGAGGTGGG GTTGCGGGCA
GATGCCGGGG TAGCGGCCTA A
|
|---|
| Protein sequence | MNVLNLKIAV SLVNAALVAG RKINAAPLTV AVLDAGGHLL ALQREDGASL IRPEVATGKA
WGAIALGKGS RLLALDAQQR PAFFAALNGM GERPVVPAPG GVLIRDQDGK VLGAVGISGD
TSDIDEQCAI SAIEEVGLRA DAGVAA
|
|---|
| |