| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1572 |
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| Symbol | |
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| ID | 5195254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1756504 |
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| End bp | 1758279 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586041 |
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| Product | glyoxylate carboligase |
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| Protein accession | YP_001266912 |
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| Protein GI | 148546810 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3960] Glyoxylate carboligase |
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| TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0611133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA TGAGAGCAAT CGATGCAGCC GTTCTGGTCA TGCGCCGTGA AGGTGTAGAT
ACCGCGTTCG GCATCCCGGG GGCTGCCATC AACCCGTTGT ATTCGGCCCT GAAGAAAGTC
GGTGGCATCG ATCACGTCCT CGCTCGTCAC GTCGAAGGTG CCTCGCACAT GGCCGAGGGC
TACACCCGCG CCAACCCGGG CAACATCGGT GTGTGCATCG GCACTTCCGG CCCTGCCGGC
ACCGACATGG TCACCGGCCT GTACAGTGCC TCGGCCGACT CCATCCCGAT TCTGTGCATC
ACTGGCCAGG CGCCACGTGC CCGTCTGCAC AAGGAAGACT TCCAGGCTGT CGACATCACT
AACATCGTCA AGCCAGTGAC CAAGTGGGCG ACCACCGTTC TGGAGCCAGG CCAGGTGCCT
TACGCCTTCC AGAAGGCCTT CTATGAAATG CGTACCGGCC GCCCAGGCCC GGTGCTGATC
GACCTGCCGT TCGACGTGCA GATGGCCGAA ATCGAATTCG ACATCGACGC CTACGAACCA
CTGGCAGTCA ACAAGCCATC CGCCACCCGC GTACAGGCCG AGAAAGCCCT GGCCCTGCTC
AATGACGCCG AGCGCCCACT GCTGGTAGCC GGTGGCGGCA TCATCAACGC CGATGCCAGC
GACAAGCTGG TCGAATTCGC CGAACTGACC GGCGTACCCG TGATCCCGAC CCTGATGGGC
TGGGGCACCA TCCCGGACGA CCACGCCCAG ATGGTCGGCA TGGTCGGCCT GCAGACCTCG
CACCGCTATG GCAACGCAAC CCTGCTGAAG TCCGACCTGG TATTCGGTAT CGGTAACCGC
TGGGCCAACC GCCACACCGG CTCGGTCGAT GTCTACACCG AAGGCCGCAA GTTCGTGCAC
GTGGACATCG AGCCGACCCA GATCGGCCGT GTGTTCACCC CGGACCTGGG TATCGTTTCC
GACGCGGGCA AGGCGCTGGA CGTGTTCCTC GAAGTGGCTC GTGAGTGGAA AGCCGCCGGC
AAGCTGAAGT GCCGCAAGGC CTGGCTGGAA GAGTGCCAGG AGCGCAAGTC GAGCCTGCAG
CGCAAGACCC ACTTCGACAA CGTGCCGGTC AAGCCGCAGC GCGTCTACGA AGAAATGAAC
CAGGTATTCG GCAAAGACAC CTGCTACGTC AGCACCATCG GCCTGTCGCA GATTGCCGGC
GCGCAGTTCC TGCATGTGTA CAAGCCTCGC CACTGGATCA ACTGCGGCCA GGCCGGCCCG
CTGGGCTGGA CCATCCCTGC TGCGCTGGGC GTGGTCAAAG CCGATCCGAA GCGCAAGGTT
GTGGCGCTGT CGGGTGACTA CGACTTCCAG TTCATGATCG AAGAACTGGC GGTGGGTGCA
CAGTTCAACC TGCCGTACGT GCACGTGTTG GTCAACAACG CCTACCTGGG CCTGATCCGC
CAGGCGCAGC GTGGCTTCGA CATGGATTAC TGTGTACAAC TGGCGTTCGA GAACATCAAC
TCGACCGACG CTGCCACCTA CGGTGTCGAC CACGTCGCTG TGGTCGAAGG CCTGGGTTGC
AAGGCCATCC GTGTGTTCGA GCCAGCAGAA ATCGCCCCTG CCCTGATCAA GGCACAGAAG
ATGGCCGAAG AGTTCCGCGT GCCGGTGGTG GTTGAAGTGA TTCTCGAGCG TGTGACCAAC
ATTTCCATGG GCACCGAGAT CAACGCGGTC AACGAGTTCG AAGACCTGGC CCTGGTCGGC
AACGACGCGC CAACCGCCAT CTCGCTGCTG GACTGA
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| Protein sequence | MSKMRAIDAA VLVMRREGVD TAFGIPGAAI NPLYSALKKV GGIDHVLARH VEGASHMAEG
YTRANPGNIG VCIGTSGPAG TDMVTGLYSA SADSIPILCI TGQAPRARLH KEDFQAVDIT
NIVKPVTKWA TTVLEPGQVP YAFQKAFYEM RTGRPGPVLI DLPFDVQMAE IEFDIDAYEP
LAVNKPSATR VQAEKALALL NDAERPLLVA GGGIINADAS DKLVEFAELT GVPVIPTLMG
WGTIPDDHAQ MVGMVGLQTS HRYGNATLLK SDLVFGIGNR WANRHTGSVD VYTEGRKFVH
VDIEPTQIGR VFTPDLGIVS DAGKALDVFL EVAREWKAAG KLKCRKAWLE ECQERKSSLQ
RKTHFDNVPV KPQRVYEEMN QVFGKDTCYV STIGLSQIAG AQFLHVYKPR HWINCGQAGP
LGWTIPAALG VVKADPKRKV VALSGDYDFQ FMIEELAVGA QFNLPYVHVL VNNAYLGLIR
QAQRGFDMDY CVQLAFENIN STDAATYGVD HVAVVEGLGC KAIRVFEPAE IAPALIKAQK
MAEEFRVPVV VEVILERVTN ISMGTEINAV NEFEDLALVG NDAPTAISLL D
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