| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1561 |
|---|
| Symbol | |
|---|
| ID | 5191019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1744199 |
|---|
| End bp | 1745155 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640586031 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001266902 |
|---|
| Protein GI | 148546800 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.207063 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTTT TTGCCAGCCT GCGATCCGCC ATGACCTCGC CCATCGACAC CCTTGAGCAA
CACCTGCTTG CCGCCCTCGA CCCTGCCCCA CAGGAAACCC GCCGCCTGTT TCACGGCCGT
GGCCGCTGCT GGCAGGGCCT GGAGCAGGTC ACCGTCGACT GGCTGCAGGG CGTGCTGTCG
GTCGCTTTGT TCCGTGAGCC GGCCGAAGGC CAGCTCGCCG AACTGGAAGC CATGCTGCGC
AGCTTGGCCG AGCGCCCGCA GTGGACGGGT CAGGCAGTCA TCATCCAGCA CCGCTACCTG
CCCGACAGCC CGGGCCAGTG GCTGCTGGGC GAGCCGTGCC AGCAACGCGA AGTGATCGAG
GACGGCCTGA CCTACCTGCT GGACTTGGGC GTTCGGCAAA ACAATGGCCT GTTCCTCGAC
ATGCGCTATG GCCGCCGTTG GGTGCGCGAG CAGGCGGCGG GCAAGCGCGT GCTGAACCTG
TTCGCTTATA CCTGCGGCTT TTCCGTGGCA GCGATTGCCG GTGGCGCTGA GCAGGTGGTG
AACCTGGACA TGGCCAAGTC GGCCTTGTCG CGGGGCCGGG ACAACCATCG CCTCAATGGC
CACGATGCAT CACGGGTGGC ATACCTGGGG CATGAACTGT TCAAGTCGTG GGGCAAGGTG
CGCAAGTACG GGCCTTATGA CCTGATCATC ATCGACCCGC CAACCTTCCA GCGTGGCAGC
TTTGTGCTGA CCCAGGATTA CGCAAAGATC CTGCGGCGTT TGCCTGAGTT GTTGAGCGAA
GGCGGGACGG TGCTGGCGTG TGTCAACGAC CCGGGGATCG GGCCTGAGTT TCTGATTGAA
GGCATGGCAG AGCAGGCGCC TTCGTTGGCT TATGTCGAAC GCCTGGAAAA CCCGCCGGAG
TTTCCGGACG TTGACCCGGC GGGGGGGCTG AAGGCCTTGG TATTCCGTCA GGTTTGA
|
|---|
| Protein sequence | MPLFASLRSA MTSPIDTLEQ HLLAALDPAP QETRRLFHGR GRCWQGLEQV TVDWLQGVLS
VALFREPAEG QLAELEAMLR SLAERPQWTG QAVIIQHRYL PDSPGQWLLG EPCQQREVIE
DGLTYLLDLG VRQNNGLFLD MRYGRRWVRE QAAGKRVLNL FAYTCGFSVA AIAGGAEQVV
NLDMAKSALS RGRDNHRLNG HDASRVAYLG HELFKSWGKV RKYGPYDLII IDPPTFQRGS
FVLTQDYAKI LRRLPELLSE GGTVLACVND PGIGPEFLIE GMAEQAPSLA YVERLENPPE
FPDVDPAGGL KALVFRQV
|
|---|
| |