| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1556 |
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| Symbol | |
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| ID | 5190947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1738617 |
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| End bp | 1739810 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640586026 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_001266897 |
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| Protein GI | 148546795 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGC GGGTAACGGT GATCGGTGGC GGAGTGGTGG GCCTGGCGAC GGCTTACGCG
CTGGTTCGGG AAGGGCGGTC GGTTGATCTG ATCGAGGCCC GCGACAGCCT GGCGTCGGCC
ACCAGTTTTG CCAATGGCGG GCAATTGTCT TATCGCTATG TGGCGCCGCT GGCTGATGCC
GGGGTGCCGT GGCAGGCGCT GGGCTGGCTG TTGCAGGGCG AGTCGCCATT GCGCTTGCGC
TTGCGCATGG ACCCGGCCCA GTGGCGCTGG CTGCTGGCAT TCACCCTGGC TTGCCGGCGT
AGCGTCAATC GCCGTAATGC CGGGCAATTG CTTGAGCTGG CGCTGTACAG CCAAGCTGTT
CTGGCGCAGT GGCGCGAACA TCAGAACCTG GGGGATTTCG CCTGGCGGCG CAATGGCAAG
CTGGTGGCTT TTCGCAGTGA ACGGGCCTTT GCCCAAGGCC GGGAACAGTT GACGGACCCG
GCCAGTCAGC AGGTGCTGGC GGCTGCCGAG CTGCGCGCGC TGGAGCCTGC CCTGGATGGC
GCACCGTTTG TGGGTGGCGT GTTCACGGCG GGCGAAGAGG TTGGCGATTG CCACGTGTTT
TGCTTGCGGC TGGAGGCGCT GTTGCGCGCG TCGGGCCAGT GCCGTTTCCT GCTTGGCCGG
CCGGTGACGC AATTGGTTCA GCGCCAGGGC CAGGTCGTGG CACTGCAACT GGGCGATCAG
CAGCTGGACG TGGAGCAGTT GGTGCTGTGT GCCGGGCATC GCGGCCCTGG CTTGGCATTA
CCGGGGGTGC AGATACCGGT TTACCCGCTG AAGGGCTACA GCCTGACCGC ACCGATCACC
TCCGGGCACC TGCCCCCGGA GGTGAGCCTT ACCGACTATG AGCGCAAAAT CGTCTATGCA
CGCCTGGGGC AGCAGCTGCG GGTAGCGGCG ATGGTGGACA TTGTCGGCTT CGACGAGTCG
GTGGACATGC GCCGTTTGCA GAGCATGCGG CGGCTGGCGC TGGAGACGCT GCCGAGGGCG
GCGGATTATG CCCAGGCGGT GGAGTGGGCG GGGATGCGAC CAGCGACACC TACCGGGGTG
CCGATCATAG GTGGGACGGT GTACCGCAAC CTGTGGCTGA ACCTGGGGCA TGGGGCGTTG
GGGTTCACCT TGGCCTGTGG CAGTGCGCAG CGTTTGGCCA GGATGATGCG TTAA
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| Protein sequence | MKQRVTVIGG GVVGLATAYA LVREGRSVDL IEARDSLASA TSFANGGQLS YRYVAPLADA
GVPWQALGWL LQGESPLRLR LRMDPAQWRW LLAFTLACRR SVNRRNAGQL LELALYSQAV
LAQWREHQNL GDFAWRRNGK LVAFRSERAF AQGREQLTDP ASQQVLAAAE LRALEPALDG
APFVGGVFTA GEEVGDCHVF CLRLEALLRA SGQCRFLLGR PVTQLVQRQG QVVALQLGDQ
QLDVEQLVLC AGHRGPGLAL PGVQIPVYPL KGYSLTAPIT SGHLPPEVSL TDYERKIVYA
RLGQQLRVAA MVDIVGFDES VDMRRLQSMR RLALETLPRA ADYAQAVEWA GMRPATPTGV
PIIGGTVYRN LWLNLGHGAL GFTLACGSAQ RLARMMR
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