Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1552 |
Symbol | |
ID | 5190720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1735946 |
End bp | 1736734 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640586022 |
Product | PhzF family phenazine biosynthesis protein |
Protein accession | YP_001266893 |
Protein GI | 148546791 |
COG category | [R] General function prediction only |
COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.857589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTCG AAATCTTCCA GGTCGATGCC TTTTCCACTG AACCGTTCGG TGGCAACCCG GCCGCAGTGA TCCCGCTGGA CAGCTGGCTG CCGGACGATG TGCTGCAGCG CATCGCTGAA GAAAACAACC TGTCAGAAAC AGCCTACTTC GTGCGCAAAG GCGAAACGTT CGACCTGCGT TGGTTCACCC CCACCGTGGA AGTCGACCTG TGCGGCCATG CTACCTTGGC CTCGGCTTAC GTGCTGTTCG AGCAACTGGG TGAGCAGGCG CAAGTACTGC GCTTCAACAC CCGCAGTGGC GAGCTGCGCG TGAGCCGCAG CACTGATGGC CTGCTGGCCA TGGACTTCCC GGCCAAACAA CCCGTAGCGG TGGACACGCC GGCGGGCCTG CTGCAGGCGC TGGGCTTGAG CCAGGCGAAG GCGGTGTACC GTAGCGACGA TTATGTGGTG GTGATCGATG ACGCCATGCT GCTCGAAACG TTGAAACCCG ACTTTGTTGC GCTGTCGGCC TTCGACGTCC GTGGCATTGC CGTGACCGCG GCAGGGCGTG GCTTTGACTT CGTCACCCGC TGGTTCGGCC CGCGGGTTGG TGTGAATGAA GACCCGGTAA CCGGTTCGGC ACACACCTCA CTGGCGCCGT TATGGGCCCA AAGGCTGGGC AAGAACGTGC TGAGCTGCGA GCAGGGCGGG GCACGCAAAG GGCAGTTGCA GTGCGAAGTG CCGGGCAATG GCCGCGTGAT CATCAGTGGG CGGGCGGCGT TGTACCTGCG GGGCAATGTG TACATCTAG
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Protein sequence | MQLEIFQVDA FSTEPFGGNP AAVIPLDSWL PDDVLQRIAE ENNLSETAYF VRKGETFDLR WFTPTVEVDL CGHATLASAY VLFEQLGEQA QVLRFNTRSG ELRVSRSTDG LLAMDFPAKQ PVAVDTPAGL LQALGLSQAK AVYRSDDYVV VIDDAMLLET LKPDFVALSA FDVRGIAVTA AGRGFDFVTR WFGPRVGVNE DPVTGSAHTS LAPLWAQRLG KNVLSCEQGG ARKGQLQCEV PGNGRVIISG RAALYLRGNV YI
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