Gene Pput_1544 details

Gene Information

• Locus tag: Pput_1544
• ID: 5192094
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida F1
• Kingdom: Bacteria
• Replicon accession: NC_009512
• Strand: +
• Start bp: 1729061
• End bp: 1729516
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640586014
• Product: cytochrome c-type biogenesis protein CcmE
• Protein accession: YP_001266885
• Protein GI: 148546783
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2332] Cytochrome c-type biogenesis protein CcmE

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAATCCGC AGCGCAAGAA ACGCCTGTTG CTCATCGTCG GCCTGCTGGT CGGCGTCGGG 
GTTGCCGTCG GCTTTGCCTT GAGCGCATTG CAGCAGAACA TCAACCTGTT CTATACACCG 
ACCCAGATCG CCAACGGCGA AGCCCCGCTG GACACGCGCA TCCGCGCCGG CGGCATGGTG 
GAGAAAGGCT CGGTGCAGCG TTCGGCCGAC TCGCTGGACG TGCGTTTCGT GGTAACCGAC 
TTCAACAAGT CGGTACCCAT CACCTACCGC GGCATCCTCC CCGACCTGTT CCGCGAAGGG 
CAGGGCATCG TCGCCCTTGG CAAGCTCAAT GCCGACGGTG TGGTGGTAGC CGATGAAGTG 
CTGGCCAAGC ACGACGAGAA ATACATGCCG CCCGAAGTCA CCAAGGCCCT GAAGGAAAGC 
GGCCAGGCCG CTGCCGGCGG AGAGACGAAG CCATGA 

 

Protein sequence

MNPQRKKRLL LIVGLLVGVG VAVGFALSAL QQNINLFYTP TQIANGEAPL DTRIRAGGMV 
EKGSVQRSAD SLDVRFVVTD FNKSVPITYR GILPDLFREG QGIVALGKLN ADGVVVADEV 
LAKHDEKYMP PEVTKALKES GQAAAGGETK P