| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1543 |
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| Symbol | |
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| ID | 5195162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1728888 |
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| End bp | 1729064 |
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| Gene Length | 177 bp |
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| Protein Length | 58 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586013 |
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| Product | Heme exporter protein D (CcmD) |
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| Protein accession | YP_001266884 |
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| Protein GI | 148546782 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3114] Heme exporter protein D |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTTG CCACCTTCGG TGACTTTCTC GCCATGGGCC ACCATGGCCT GTACGTGTGG
TCGGCCTATG GCATCTGCCT GGCGGTGCTG GCGCTGAATG TCGGTGCGCC ACTGCTGGCT
CGTCGTCGCT ATTTGCAAGA AGAGGCGCGC CGTTTGCGCC GGGAGAACAA CCAGTGA
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| Protein sequence | MSFATFGDFL AMGHHGLYVW SAYGICLAVL ALNVGAPLLA RRRYLQEEAR RLRRENNQ
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