Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1535 |
Symbol | |
ID | 5190218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1720887 |
End bp | 1721366 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640586005 |
Product | putative CheW protein |
Protein accession | YP_001266876 |
Protein GI | 148546774 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.107211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.640168 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGT CGTCTGCACA AGGTTCCGAA GATCCGATCC TGCAGTGGGT TACCTTCCGT CTGGACAACG AGTCCTACGG CATCAATGTG ATGCAGGTGC AGGAAGTACT GCGCTACACC GAGATTGCCC CGGTGCCGGG TGCGCCGAGC TACGTGCTGG GCATCATCAA CTTGCGCGGT AACGTGGTGA CGGTGATCGA CACGCGTCAG CGTTTTGGCC TGATGCCGAC CGAAGTGACC GACAACACCC GTATCGTCAT CATCGAAGCC GACAAGCAAG TGGTCGGCAT TCTGGTCGAC AGCGTGGCCG AAGTGGTTTA CCTGCGCCAG TCCGAAATCG AGACCGCGCC GAACGTGGGT AACGAAGAGT CGGCCAAGTT CATTCAGGGC GTGTGCAACA AGAATGGCGA ACTGCTGATC CTGGTCGAAC TGGACAAGAT GATGACCGAG GAAGAGTGGT CCGAGCTGGA GAACATCTGA
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Protein sequence | MKKSSAQGSE DPILQWVTFR LDNESYGINV MQVQEVLRYT EIAPVPGAPS YVLGIINLRG NVVTVIDTRQ RFGLMPTEVT DNTRIVIIEA DKQVVGILVD SVAEVVYLRQ SEIETAPNVG NEESAKFIQG VCNKNGELLI LVELDKMMTE EEWSELENI
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