Gene Pput_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1535 
Symbol 
ID5190218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1720887 
End bp1721366 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content57% 
IMG OID640586005 
Productputative CheW protein 
Protein accessionYP_001266876 
Protein GI148546774 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.107211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.640168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT CGTCTGCACA AGGTTCCGAA GATCCGATCC TGCAGTGGGT TACCTTCCGT 
CTGGACAACG AGTCCTACGG CATCAATGTG ATGCAGGTGC AGGAAGTACT GCGCTACACC
GAGATTGCCC CGGTGCCGGG TGCGCCGAGC TACGTGCTGG GCATCATCAA CTTGCGCGGT
AACGTGGTGA CGGTGATCGA CACGCGTCAG CGTTTTGGCC TGATGCCGAC CGAAGTGACC
GACAACACCC GTATCGTCAT CATCGAAGCC GACAAGCAAG TGGTCGGCAT TCTGGTCGAC
AGCGTGGCCG AAGTGGTTTA CCTGCGCCAG TCCGAAATCG AGACCGCGCC GAACGTGGGT
AACGAAGAGT CGGCCAAGTT CATTCAGGGC GTGTGCAACA AGAATGGCGA ACTGCTGATC
CTGGTCGAAC TGGACAAGAT GATGACCGAG GAAGAGTGGT CCGAGCTGGA GAACATCTGA
 
Protein sequence
MKKSSAQGSE DPILQWVTFR LDNESYGINV MQVQEVLRYT EIAPVPGAPS YVLGIINLRG 
NVVTVIDTRQ RFGLMPTEVT DNTRIVIIEA DKQVVGILVD SVAEVVYLRQ SEIETAPNVG
NEESAKFIQG VCNKNGELLI LVELDKMMTE EEWSELENI