Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1527 |
Symbol | |
ID | 5192081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1712725 |
End bp | 1713111 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640585997 |
Product | response regulator receiver protein |
Protein accession | YP_001266868 |
Protein GI | 148546766 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.400069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.607345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGACAAGA ACATGAAAAT CCTCATCGTT GACGACTTTT CGACGATGCG GCGGATCATC AAGAACCTGT TGCGTGACCT GGGTTTCACC AACACCGACG AAGCCGATGA CGGCACCACG GCGTTGCCGA TGCTGGAAAA CGGTCACTAC GACTTCCTGG TGACCGACTG GAACATGCCG GGCATGTCCG GCATCGACCT GCTGCGTAAA GTGCGTGCCA GCGACAAGCT GAAAAGCATG CCGGTCTTGA TGGTGACCGC TGAAGCCAAG CGCGACCAGA TCATTGAAGC GGCACAGGCC GGCGTCAATG GTTACGTGGT CAAACCGTTC ACCGCTCAGG TGCTCAAAGA GAAGATCGAG AAGATCTTCG AACGCGTCAA CGGCTGA
|
Protein sequence | MDKNMKILIV DDFSTMRRII KNLLRDLGFT NTDEADDGTT ALPMLENGHY DFLVTDWNMP GMSGIDLLRK VRASDKLKSM PVLMVTAEAK RDQIIEAAQA GVNGYVVKPF TAQVLKEKIE KIFERVNG
|
| |