Gene Pput_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1527 
Symbol 
ID5192081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1712725 
End bp1713111 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content56% 
IMG OID640585997 
Productresponse regulator receiver protein 
Protein accessionYP_001266868 
Protein GI148546766 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.400069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.607345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACAAGA ACATGAAAAT CCTCATCGTT GACGACTTTT CGACGATGCG GCGGATCATC 
AAGAACCTGT TGCGTGACCT GGGTTTCACC AACACCGACG AAGCCGATGA CGGCACCACG
GCGTTGCCGA TGCTGGAAAA CGGTCACTAC GACTTCCTGG TGACCGACTG GAACATGCCG
GGCATGTCCG GCATCGACCT GCTGCGTAAA GTGCGTGCCA GCGACAAGCT GAAAAGCATG
CCGGTCTTGA TGGTGACCGC TGAAGCCAAG CGCGACCAGA TCATTGAAGC GGCACAGGCC
GGCGTCAATG GTTACGTGGT CAAACCGTTC ACCGCTCAGG TGCTCAAAGA GAAGATCGAG
AAGATCTTCG AACGCGTCAA CGGCTGA
 
Protein sequence
MDKNMKILIV DDFSTMRRII KNLLRDLGFT NTDEADDGTT ALPMLENGHY DFLVTDWNMP 
GMSGIDLLRK VRASDKLKSM PVLMVTAEAK RDQIIEAAQA GVNGYVVKPF TAQVLKEKIE
KIFERVNG