Gene Pput_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1524 
SymbolflhF 
ID5191440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1709658 
End bp1710965 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content65% 
IMG OID640585994 
Productflagellar biosynthesis regulator FlhF 
Protein accessionYP_001266865 
Protein GI148546763 
COG category[N] Cell motility 
COG ID[COG1419] Flagellar GTP-binding protein 
TIGRFAM ID[TIGR03499] flagellar biosynthetic protein FlhF 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.142564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.531754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTTA AGCGATTTTT CGCCGCCGAT ATGCGTCAGG CCATGAAACT GGTCCGTGAC 
GAGCTGGGCG CCGATGCCGC AATCATTGGC AACCGCCGCA TTGCCGGTGG TGTCGAGCTG
ACGGCCGCGC TGGACTACAA GCTGTCCGCC CTGGCCCCGC GTGTGCCCAA CGCCGAGCTG
GAAGAAGAGC TGCGCAAGAC CCACACGCGC ATTGCCACTG CCCAGGCCGA GCTGGACCAG
CGTCAGGACA GCAGCGACAA CAACCGCCAA TTGTTCGCCG GGCAATCTTT GACCGCTGCC
GAACCGTTGA TCGAGCCGCA CGTCGATGCC CCTGAGGCCG CCGCCGTACC GGCTGCTGCG
CCGGTTGACC CGCGCCTGTT CGATGCCATG CGCTCGGAGC TGTCGGGCCT GCGCGAGCTG
CTGGAAGTGC AACTCGGTTC GCTGGCCTGG AATCAGCTGC AGGGCAGCAA GCCGCAGCAG
GCCAACCTTT GGCGCCGCCT GCAGCGCATC GGCCTGTCCG GGCCGATCGC CCGCGAGCTG
CTGGACCTGA CCGCCGAGAT CGAGGAACCG CGCCAGGCCT GGCGCATGCT GCTGGCTCAC
TTGGCGCGGA TGATCGAAGT ACCTGAAATC GAGCCGATCG AAGAGGGCGG GGTGATCGCC
ATGGTCGGCC CGGCGGGCAT GGGCAAGACC ACCACCCTGG CCAAGCTGGC CGCGCGCTAC
GTACTCAAGT ACGGCGCGCA GAACCTGGCG CTGGTGAGCA TGGACAGCTT CCGTATCGGC
GCCCAGGAGC AGCTCAAGAC CCTGGGCCGC ATCCTCAACG TGCCGGTGAC TTACGTCGAC
CCGGGCCAGT CGCTGGCAGC AGCGCTGGAG CCACTGCTGC GCAAGCGCGT GGTGCTGATC
GATACTGCCG GCCTGCAAGC CAGCGACCCT GCGCTGCGCA TGCAGCTGGA AACCTTGGCC
GGGCGTGGCA TTGCCGCGAA GAACTACCTG GTGCTGGCCA CCACCAGCCA GAAGCAGGTG
CTGACCGCCG CCTACCACAG CTACAAGCGC TGTGGCCTGG CCGGCTGCAT CCTGACCAAA
CTCGATGAAA CGGCAAGCCT TGGCGATGTG TTGAGCCTTG CCATCAGTCA TGAACTGCCA
GTGGCCTATC TTACCGATGG CCCACGCATT CCTGACGACC TGCACCTGCC AAGGGGCCAC
CAGTTGGTCA CGCGGGCGGT GAATGTGCAG CAGCAGGACG AGCCCAGCGA AGAGGCCATG
GCCGACATGT TCGCTGATCT CTATCACAAC CCACGGCGAG CGGGTTGA
 
Protein sequence
MQVKRFFAAD MRQAMKLVRD ELGADAAIIG NRRIAGGVEL TAALDYKLSA LAPRVPNAEL 
EEELRKTHTR IATAQAELDQ RQDSSDNNRQ LFAGQSLTAA EPLIEPHVDA PEAAAVPAAA
PVDPRLFDAM RSELSGLREL LEVQLGSLAW NQLQGSKPQQ ANLWRRLQRI GLSGPIAREL
LDLTAEIEEP RQAWRMLLAH LARMIEVPEI EPIEEGGVIA MVGPAGMGKT TTLAKLAARY
VLKYGAQNLA LVSMDSFRIG AQEQLKTLGR ILNVPVTYVD PGQSLAAALE PLLRKRVVLI
DTAGLQASDP ALRMQLETLA GRGIAAKNYL VLATTSQKQV LTAAYHSYKR CGLAGCILTK
LDETASLGDV LSLAISHELP VAYLTDGPRI PDDLHLPRGH QLVTRAVNVQ QQDEPSEEAM
ADMFADLYHN PRRAG