| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1521 |
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| Symbol | |
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| ID | 5195277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1705353 |
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| End bp | 1706411 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640585991 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001266862 |
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| Protein GI | 148546760 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA ATGTGATCGC ACTGGTTTTT GGGGGGCGGA GCTCAGAGCA TTCAGTGGCG
CTACGCTCCG CCGCTACAAT CCACGCGGCG CTGATGGCTC TCGGTCACAG GGTGCACTGT
GTAGGGATAG ATCGTGAGGG CAACTGGAGG TATCAAGGAG AGCCGTGCCA GTTCCCTGGT
GCGGTTGATC GGTCGGCTCC GTTGATTTCA ATTCGTCCAG GCCATCGCTC GCTCTCATAC
ACAACTCAAG AGAGCGGCAC GGTGGAGATT GGGATCGATT TGCTTTTCCC GGCACTGCAT
GGTCGGTGGG GGGAGGATGG AACAATTCAA GGATTGGCAG CGATGTGCGG TTTGCCGTGT
GTGGGCTCCG GGGTGCTAGG TTCGGCAATG GCCATGGATA AAGATGTCAC AAAGAGAATG
GTCCAGTCTG CCGGGCTTGT TGTGGGGCCT TGGCTGGCCT TGAACTCCAT GCGTCCTTGG
GAGGAACTGG TTGAGTGCCT GGGTAGCAGC ACGCTCTTCG TAAAGCCCGC TACTTCGGGC
TCATCGATTG GTGTGTCTAG GGTCTCCAAC GCCTTGGAAT ATGCTGCGGC ATTTGCTATT
GCAGCACGAG AAGACACAAA GGTGCTGGTG GAGGCTGCTG TCTGTGGAAG AGAGATAGAG
TGTGGTGTGC TCGAGCTTGA GGAGGGTTTG ATGGCCTCGG TGGTGGGTGA AATAATCAAA
AAGGAAGGGC ACGCCTATTA CGATTATCAG GCGAAATACG ATTCCAACAG TGTGACAGGT
CTTCGTGTGC CAAGCTTGTT GCCACCTGAC ATTGTCGCGC GCATCCAGGC TTTATCTGTC
CAGGCGTTTA GATGCCTTGA ACTGAAGGGG TACGCCAGGG TGGATTTTTT CTTGACAGAA
GAGGGTGAGA TTATTCTCAA TGAGATCAAT ACCTTACCCG GATTTACGAG TGCCAGTATG
TACCCGAAGA TGTTTGAGTG CTCCGGTTAC CCTCCGCCGA AGTTGGTAGG AGCGCTAGTC
GAATATGGGC TCTCATCAGC ATCTAAAGAA CGTTTATGA
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| Protein sequence | MKQNVIALVF GGRSSEHSVA LRSAATIHAA LMALGHRVHC VGIDREGNWR YQGEPCQFPG
AVDRSAPLIS IRPGHRSLSY TTQESGTVEI GIDLLFPALH GRWGEDGTIQ GLAAMCGLPC
VGSGVLGSAM AMDKDVTKRM VQSAGLVVGP WLALNSMRPW EELVECLGSS TLFVKPATSG
SSIGVSRVSN ALEYAAAFAI AAREDTKVLV EAAVCGREIE CGVLELEEGL MASVVGEIIK
KEGHAYYDYQ AKYDSNSVTG LRVPSLLPPD IVARIQALSV QAFRCLELKG YARVDFFLTE
EGEIILNEIN TLPGFTSASM YPKMFECSGY PPPKLVGALV EYGLSSASKE RL
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