Gene Pput_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1514 
SymbolflhB 
ID5191663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1697682 
End bp1698824 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content60% 
IMG OID640585984 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_001266855 
Protein GI148546753 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.819465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.151941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAA GCGAGAGCGG TCAGGACAAG ACAGAAGAGC CCACCGAGAA GCGCAAGCGC 
ACTGCCCGCG AGAAGGGAGA GATCGCGCGC TCCAAAGAGT TGAACACCGT GGCGGTGACG
TTGGCCGGCG CGGGTGGCTT GCTGGCGTTT GGTGGGCACC TGGCCGAGAC CTTGCTTGCC
ATGATGCGCA TGAATTTCAG CCTGACCCGC GACATCATCG TCGACGAGCG CGCCATGGGG
GCCTTTCTTC TGGCTTCGGG CAAGATGGCC ATCTGGGCGG TACAGCCGAT ACTGATCCTG
TTGTTCGTGA TCGCCTTTGT CGCACCCATC GCCCTGGGCG GTTTCCTGTT TTCCGGCAGC
CTGTTGCAGC CGAAATTCAG CCGCATGAAC CCGTTGTCGG GGATCAAGCG CATGTTCTCG
ATGAATGCCC TGACCGAGTT GTTGAAGGCG CTCGCCAAGT TTTTCGTGAT TCTGGTAGTG
GCGATAGTGG TGCTGGTCAA CGACCGCCAG GCGTTGCTCT CCATTGCCAA CGAGCCTTTG
GATCAAGCGA TCATACACAG TGTTCAGGTG GTTGGCTGGA GTGCGCTGTG GATGGCGGCA
GGGTTGTTGC TGATTGCGGC GGCGGATGTA CCATTCCAGC TGTGGCAGGC ACACAACAAG
CTGAAGATGA CCAAGCAGGA GGTGCGTGAC GAGTACAAGG ACTCCGAAGG CAAACCCGAG
GTCAAACAGC GTATTCGCCA GCTGCAGCGC GAGGCTTCGC AGCGGCGCAT GATGGCGGCG
GTGCCTGATG CAGACGTGAT CATCACCAAC CCGACGCACT ATGCGGTGGC CTTGCAATAC
GACCCGGAGA AGGGTGGGGT GGCGCCACTG TTGCTGGCCA AGGGGACCGA CTTCATTGCC
TTGAAGATCC GCGAGATTGG CGTGGAGCAC AAGGTCCAGA TTCTCGAGTC GCCAGCGCTG
GCGCGGGCGA TCTATTACTC CACCGAAATT GAGCAGGAAA TCCCTGCTGG CCTGTACCTG
GCGGTGGCCC AGGTGTTGGC GTATGTGTTC CAGATTCGCC AATACCGATC CGGCAAAGGC
AAGCGCCCAG AGCCGCTGAA AGACGACCTG CCGATCCCGC CGGACCTGCG CCGCGACAGT
TGA
 
Protein sequence
MAESESGQDK TEEPTEKRKR TAREKGEIAR SKELNTVAVT LAGAGGLLAF GGHLAETLLA 
MMRMNFSLTR DIIVDERAMG AFLLASGKMA IWAVQPILIL LFVIAFVAPI ALGGFLFSGS
LLQPKFSRMN PLSGIKRMFS MNALTELLKA LAKFFVILVV AIVVLVNDRQ ALLSIANEPL
DQAIIHSVQV VGWSALWMAA GLLLIAAADV PFQLWQAHNK LKMTKQEVRD EYKDSEGKPE
VKQRIRQLQR EASQRRMMAA VPDADVIITN PTHYAVALQY DPEKGGVAPL LLAKGTDFIA
LKIREIGVEH KVQILESPAL ARAIYYSTEI EQEIPAGLYL AVAQVLAYVF QIRQYRSGKG
KRPEPLKDDL PIPPDLRRDS