Gene Pput_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1500 
SymbolfliH 
ID5190367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1686552 
End bp1687346 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content65% 
IMG OID640585970 
Productflagellar assembly protein H 
Protein accessionYP_001266841 
Protein GI148546739 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.309045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACCA AAGAACACCA CCCCAGCGAC CTGATCCGCG CCCGCGACCT TGAGGGCGTG 
GACGTGTGGA CGCTGCCCAG CTTCGACCCG GAACCGGAGC CTGCGCCCGA GCCAGAGCCG
GAACCCGAGG TCATCGCGGA AGAAGTCGAG GAAGTGCCGC TGGAAGAAGT CCAGCCGCTG
ACCCTGGAAG AGCTCGAAGC CATCCGTCAG GAGGCCTACA ACGAGGGCTT CGCCACCGGT
GAGCGCGAGG GCTTCCACAG CACCCAGCTC AAGGTTCGCC AGGAGGCCGA AGAGGCCCTG
AAGGCCAAGC TGGAAAGCCT CGAGCGGCTG ATGGCCAACC TGATGGAGCC GATCGCCGAG
CAGGATACGC AGATCGAGAA AAGCCTGGTG CACCTGATCG CGCACATGAG CCGCCAGGTG
ATTGGCCGCG AGCTGCGCAA CGATTCCAGC CAGATCACTC AGGTGCTGCG CGAAGCGCTC
AAGCTGCTGC CCATGGGCGC GGACAATATC CGCATCCACC TCAACCCGCA GGATTTCGAG
CTGGCCAAGG CCCTGCGCGA ACGCCATGAG GAGAACTGGC GGCTGCTGGA AGACAGCGCG
CTGCTGCCGG GTGGTTGCCG CATCGAGACG GCCCACAGCC GTATCGACGC CACCATGGAA
ACGCGTATCG AAAAAGCGGT GGCGCAGCTG TTCGACCAGT TGCACGACCA TTCCCTGCAC
CCGGCGGCGC CAGACCTGTC GATAGACCTG GACGCGCCGG CCGAGCGTGC CGTGGACAGC
CCAGATGCAC CTTGA
 
Protein sequence
MPTKEHHPSD LIRARDLEGV DVWTLPSFDP EPEPAPEPEP EPEVIAEEVE EVPLEEVQPL 
TLEELEAIRQ EAYNEGFATG EREGFHSTQL KVRQEAEEAL KAKLESLERL MANLMEPIAE
QDTQIEKSLV HLIAHMSRQV IGRELRNDSS QITQVLREAL KLLPMGADNI RIHLNPQDFE
LAKALRERHE ENWRLLEDSA LLPGGCRIET AHSRIDATME TRIEKAVAQL FDQLHDHSLH
PAAPDLSIDL DAPAERAVDS PDAP