Gene Pput_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1497 
SymbolfliE 
ID5191715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1683251 
End bp1683583 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content61% 
IMG OID640585967 
Productflagellar hook-basal body protein FliE 
Protein accessionYP_001266838 
Protein GI148546736 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.113287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.994821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG GTGTTGAATT CAATCGTCTG ATGTTGGACA TGCGGGCCAT GCAGGCCGAT 
GCCATGTCGC TGCCCAAGGT AACGGCCGCC CCCGAGCTGG CGCCAGGGCA AAGCACCTTC
GCCGACATGC TCGGCCAGGC CATCGGCAAG GTGCATGAGA CGCAGCAGGC CTCGACCCAA
CTGGCCAACG CGTTCGAAAT CGGCAAGAGC GGCGTCGACC TGACTGACGT GATGATCGCT
TCGCAGAAGG CCAGCGTGTC GATGCAAGCC ATGACCCAGG TACGCAACAA GCTGGTCCAG
GCGTACCAGG ACATCATGCA GATGCCGGTT TGA
 
Protein sequence
MSQGVEFNRL MLDMRAMQAD AMSLPKVTAA PELAPGQSTF ADMLGQAIGK VHETQQASTQ 
LANAFEIGKS GVDLTDVMIA SQKASVSMQA MTQVRNKLVQ AYQDIMQMPV