| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1488 |
|---|
| Symbol | |
|---|
| ID | 5192964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1673871 |
|---|
| End bp | 1674806 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640585958 |
|---|
| Product | Beta-ketoacyl-acyl-carrier-protein synthase I |
|---|
| Protein accession | YP_001266829 |
|---|
| Protein GI | 148546727 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGGCA TTAAAAGCAT CGCCAGTTAC GTACCTGTGA ATGGTGTAGA CAACTACGCC
CAAGGTGCGA AATTCGGCAA GGATCAAGAG TTCATTTTCG GCAAGATCGG TTCCACCTTC
TTGCCGCGCA AGGATGCCAA CCAGGAAACA TCCGATCTTT GCGTCGAGGC AGCCAATGCA
TTGTTTGCCG CCAACCCGTC GCTGAATCCA GCTGCCATTG ACGCAGTGAT AGTGGTCACT
CAGAACGGCG ATGCCGAAGG TCTGCCGCAT ACCGCGGCGA TTGTTCAGCA CAAGCTCGGG
CTTTCGACCG CCGTTGCGGC CTTCGATATT TCACTGGGCT GCTCGGGCTA TGTCTACGGC
TTGTATGCGA TGAAGGGTTT CATGGAGGCC GCGGGCCTCA AAAACGGCCT GCTGATCACT
GCCGACCCTT ACTCGAAGAT TGTCGACCCG GAAGATCGCA ACACCACCAT GCTGTTTGGT
GACGCCGCCA CCGCCACCTG GATGGGTGAG GACGCTGCCT GGCAATTGGG CAAGTCGTTG
TTCGGCAGCG ATGGCGCGGG TGCCGAGCAC TTGCGTACCA CCGATGGCAA GTTCTTCATG
AATGGTCGCC AAGTCTATAA CTTTGCCTTG GTCAAGGTGC CGGCGCACTT GCAACAGTTG
CTTGAAGCCA GCTCACTGCA GGCCGACGAC ATCGACCTGT ACTGCCTGCA TCAGGGCAGC
GCGGCGATCG TGGATGCCGT TTCGTCGCGC TTCGATGAAG GCGAGCACAA GCAGAGGTTC
GTCAAGGATA TGGTCGAAAC GGGCAATACC GTGTCCTCGA GCATACCGCT GCTGCTGGAA
AAGCACGTGC TTGGCTCCGG CTGCAAGCGC GTGGCGCTGA GTGGCTTCGG GGTGGGCTTG
TCGTGGGGCT CGGCCATTAT CGAACGCTGC GACTGA
|
|---|
| Protein sequence | MIGIKSIASY VPVNGVDNYA QGAKFGKDQE FIFGKIGSTF LPRKDANQET SDLCVEAANA
LFAANPSLNP AAIDAVIVVT QNGDAEGLPH TAAIVQHKLG LSTAVAAFDI SLGCSGYVYG
LYAMKGFMEA AGLKNGLLIT ADPYSKIVDP EDRNTTMLFG DAATATWMGE DAAWQLGKSL
FGSDGAGAEH LRTTDGKFFM NGRQVYNFAL VKVPAHLQQL LEASSLQADD IDLYCLHQGS
AAIVDAVSSR FDEGEHKQRF VKDMVETGNT VSSSIPLLLE KHVLGSGCKR VALSGFGVGL
SWGSAIIERC D
|
|---|
| |