| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1481 |
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| Symbol | |
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| ID | 5191971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1662602 |
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| End bp | 1663924 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585951 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001266822 |
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| Protein GI | 148546720 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.896141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC AAACGGCGCA GCAGTTGCGC CAGCAAATTA CCGAGCTCGT TGGCCGTTAT
GCCGAGTTGG AGCTGGCCGC GCCCGTTTTT GTACCTGGCC AGCATGCGGT TCCGCCCTCT
GGCAAAGTCA TTGGCGCACC CGAACTGCAA GCCATGACCG AAGCGGTACT GGACGGCTGG
TTGACCACCG GGCGCTTCAA CCAGGCATTC GAAAAACGCC TGGCACGCTA CCTGGGGCGG
CGTGGCGTAC TCACCGCCAA CTCCGGCTCT TCGGCGAACC TGTTGGCGTT TTCCGCCTTG
ACTTCGCCAC GCCTGGGGGA TCGTGCCATT CGTAAGGGGG ACGAGGTGAT TGGCGTGGCG
GCGGGTTTTC CTACCACCGT CAACCCGATC CTGCAATTTG GTGCCGTGCC GGTCTTCGTC
GATATCGAGA TGGGTACGTA TAACGTCGAC CCGGCCTTGA TCGAGGCGGC AATCAGCCCG
CGGACCAAGG CGATCATGCT GGCCCACACG CTGGGCAACC CGTTCAACCT GGCCGTGGTA
CGAGAATTGT GCGACCGCTA CGGTTTATGG TTGATCGAGG ACTGCTGCGA TGCGCTCGGC
GCCACCTACG ATGGCCGCCA GGTAGGCAGC TTCGGCGACC TCGGTACGCT CAGCTTCTAT
CCGGCCCACC ATATCACCAT GGGCGAGGGC GGGGCGGTTT TCACCGATTC TCCGCTGCTC
AAGCGTATCG TCGAATCGTT CCGTGACTGG GGGCGTGACT GCTATTGCGG ACCAGGCGAA
GACAATACCT GCAGCAAGCG TTTCTGCTGG CAGCTGGGCG ACCTGCCGCA AGGTTATGAC
CACAAGTACA CCTATTCCCA CCTGGGCTAC AACCTCAAGA TCACCGACAT GCAGGCTGCC
TGTGCGTTGG CACAGATGGA CCGGGTGGAC GATTTCATCG CTGCACGCAA GCGTAACTTT
GCCTGGCTCA GCGAGCGCTT GTCCGGGTGT GTGGAGCAGC TGATCCTGCC ACATGCCACC
CCCAACAGCG ACCCGTCCTG GTTCGGCTTC CCGCTGACGC TGCGGGATGG TTGTGGCGTC
GAGCGGCTGG ATCTTTTGCG TCATCTCGAT GCGCAGAAGG TGGGTACTCG CCTGCTGTTC
GCTGGCAATC TTACACGACA GCCCTACATG AAAGACCAGC AATACCGGGT AGCCAGTGAC
CTGACGGTGA CAGACAAGAT CATGAAGGAC ACCTTCTGGG TCGGTCTGTG GCCAGGGCTT
GGCGAAGACC ATCTTGAGCA TGTGGCCGAC AGCATCGAAG CCTATGTACG GAGGCTGCGT
TGA
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| Protein sequence | MTDQTAQQLR QQITELVGRY AELELAAPVF VPGQHAVPPS GKVIGAPELQ AMTEAVLDGW
LTTGRFNQAF EKRLARYLGR RGVLTANSGS SANLLAFSAL TSPRLGDRAI RKGDEVIGVA
AGFPTTVNPI LQFGAVPVFV DIEMGTYNVD PALIEAAISP RTKAIMLAHT LGNPFNLAVV
RELCDRYGLW LIEDCCDALG ATYDGRQVGS FGDLGTLSFY PAHHITMGEG GAVFTDSPLL
KRIVESFRDW GRDCYCGPGE DNTCSKRFCW QLGDLPQGYD HKYTYSHLGY NLKITDMQAA
CALAQMDRVD DFIAARKRNF AWLSERLSGC VEQLILPHAT PNSDPSWFGF PLTLRDGCGV
ERLDLLRHLD AQKVGTRLLF AGNLTRQPYM KDQQYRVASD LTVTDKIMKD TFWVGLWPGL
GEDHLEHVAD SIEAYVRRLR
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