| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1476 |
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| Symbol | |
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| ID | 5195505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1654185 |
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| End bp | 1657763 |
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| Gene Length | 3579 bp |
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| Protein Length | 1192 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585946 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001266817 |
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| Protein GI | 148546715 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0438] Glycosyltransferase
[COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.891442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGAGC AGCCACTCGT CAGCATCGCC ATTCCTGCCT TCAATGCCGA TTTCTTTCAA
GCCACCTTGG TCAGTGCGCT TGGCCAAGAC TACCCCAACC TGGAAGTCGT CATTTGCGAT
GACAGTGCTG GTGTGGAAAT CGAGGCTATC TGCCAGGCGC TCGGCAAGGG TACGGCGGTG
CCCGTGCGCT ATACCCGCAA CCCGGTTCGG TTGGGTTTTG CACGTAACCT ACAAGCATGC
CTGGAGCAGG CCAACGGGGC GTTGGTGAAG TTTCTGTGTG ATGACGACCT GTTGCTCGAC
AGTTGCATCA GCCGGCAAGC ACAAGTGCTG ACGCAGTGGC CCCAGCTCAG CATGGTGATC
GGGCAGCGCC TGCTCTGGTC TGCTGATGAC ATCCTCCTGC CTTCCCGTGC GCTCAACAGC
GTGATTGCGC CGCAAAGTGC CGTGCTTGTG GGTACGGACT TGCTGGCCAG CATCGCCGAG
AATGTCCCGA ATCTGTTCGG CGGTATCAGC CATGTGCTGT TCCGTCGGGC CCAGGTGCTG
GAGTACCTGC CGCAACTGGT CCAGGGTGGC CAGGGGTTCG CCGCACGACT GGACCTGGCC
TTGTATGCAT GTCTGTTGCG CCGCGGGCAT CTGGCGAGCC TGGAGCGCAT ACTGAGTGTG
GAGCGCATCC ACCCAGGCCG GCTCAGTCAT CACTCCAGCA TGACCGAGGC CTACAGGCAT
GAAACCGAAT GGCTGCAGCA GATGCTGGCG GCGCGCACCG GCGAGTCGGC GCCGGCCAAT
GGCTGGGTCC GTTACCTGCC GCTGGAGGCT TACGACCCTG AGGCCGACCA GGCCTGGGAG
GAGTTGGACA TCCGCCGCTT CCATGCCGGC CAGGTCGCCA ATTTCTCGCA GCAGGTAGGC
ACTCACGCAC TCAGCTTCAC CGAGCTCTAT GCCGAATGGC TGGCCTGCCG CAACCTGTCT
GACGGGCAGT TGCGGTTGCT GCCAAAGCGG ATCGAACAGT GGCCAGCACA GCCCGGCATC
GTTCCGATCG TAACCTGTCG CGAGGGCGAT GAAAGCGCAC TGCGTGCCAC CCTGGACTGC
CTGGCTGCAC AATCCTATGC CGCCAGCCAG GTGTTGGTGC TGGTGCCTGA TTGCTTCGAC
AGGGTTGACG CGCCAGGCGT GCACTACCTG GCCTTGAGCG GTAGTGGGTA CGCTCAACTC
AACCAGTGGC TGGCAGATAC GCGCGTAGCC GACTGGGTGC TGCTGTTGCG TGCCGGTGAT
CGCCTACGGC CGCATGCGCT GGTCGTCATG GCCGAGCGTA TGGCGCTGCG CGCCGAGAGC
ATGTGCCTGT ACACTGATGA AGACACCTTT GGAGCCCTGG CACCCGGCAG CCCGATTTTC
AAGCCGGACT TCAACCTCGA TTTGATGCGC AGCGTGCCCT ATGTGGGCCG TACCCTGGCA
TTCAAGCGTA CGGCGCTGCT GGCACTGGAA GGGTTCGACA CCCAGTTCGA GAGCCTGGCG
CCACAGGACC TGCTATGGCG AATGGTCGAG GCTCATGGCT TGCACGTGGT AGAGCATGTC
GCGCAGATGC TGGTGCAGTG CCAGTGGGGG TACACAGACT GGATGGGCGA GCCGGCAGGG
CAGGCTGAGG CGGCGCGCGT GGTCGAGGCG CACTTGCGTC GCATAGGCGT CGACGCTTTG
GTTGAGGGGG CTGCCGGCAG CTTGGTTACG CGTGTGACCT ATCGGCATGA GCAGCAGGCT
AGTGTTTCGA TCCTGATCCC CGCAGGGGCC AACCTGAATG CGCTCAGGCG TTGCGTCGAG
TCGCTGTTCC AGTACACCGA ATACAGCCAG TTCGAAGTGC TGGTCATCGC CAATGGCGAC
GAGCCGCAGG CTGTCACCGA GTGGTTGGCG GCGATGCGTG GCCTGGGCAG TGACCAGTTG
CGCGTCATCG ATGTTCAGGC GCAGGGCAGG GCGGCGATCC TCAATCAGGC CAGTCAGCAT
GCTCATGGAG CTTACTTACT GTTGCTCGCA CCGGAGTGTG CGCTGTTTGA ACCGCGCTGG
CTCACTACCT TGATGAGTCA GGCGCAGCGT CCCGAGGTCG GCCTGGTGGG GCCGGCGCTA
TGCGGCAGCA ACGGCGAGCT GGTTTCTTCC GGCCTGGTGC TCGGTCTTGG CGGCGGTACA
GCAGGTAGCC CATTCTCGGG CAGCTTCCTG ACAGCCGAGG GTTACATGGG GCGCCAGCAG
TTGGTACAGA ACTGGAGCGC ACTAAGCCTG GATTGCCTGC TCATTCGCCG GACACTGTTC
GAGGAGCTTG AGGGGCTGGA CACCTCGGCC TTCCAGGTCG CGTTGTTTGA CGTTGACCTC
TGCCTGCGTG CGCGTGAAAA AGGCTTCCTG TCGGTGGGGA CACCCTTTGC TCGCGTCATG
AGGCTAGCGG GTGCTGCTGC TGTCGGGCTG GCTGACGAGC TTGCCAGAGC CGACCGGGAC
GTTGCTTACG ACCGTTGGCT GAGCCGCATT GCCCGGGACC CGGCCTACAA CGACAACCTG
AGCCTCAAGT TCGCCAACTT CAACCTCGAA CCAGGCCTGC GCAGTGGCTG GGACCCCTTC
ATTGCCCGTG CCATGCCGTC AGTGCTGGCG TTGCCGATCA ATACAACGGC AGTAGGGCAT
TACCGGGTAA TTCAGCCATT CACCGAACTT GAGCGGGCGG GCTGGATTCA GGGGCGGGTC
AACCATGTCT CACCAGGCAT TATCGAGCTT GAGCGTGAAA AACCCGATGT GATGATCCTG
CAATGTCGTT ACATGCCGGG CAACATCAGG GAAATGGCGC AGTTCAAACG CTTTTCGCAT
GCGCGGATGA TCTACGAGCT GGACGACTAC ATCATCGATC CGCCGAAAAA GAACGACCAT
GCCCGCAACC TGCCCAGCAA TCTTGCGGAG TTGGTGGCCC AAGGCATCGG GCAGTGTGAT
CGCTTGGTGT GTTCGACCGA GCCGCTGGCT GATGCGTTAT CCAGCATGCA TCAGGACATA
CGCGTAGTGC CCAACATGTT GTCCGCCGCG CTGTGGGCTG GCCTTTCCAG TCAGCGTCAG
ACCAGTATCC GGCCGCGAGT CGGATGGGCG GGTGGCACTA GCCATCGTGG TGACCTGGAG
CTGTTGCAAG AGGTAGTGAA GGCGCTTGCC AACGAGGTTG ACTGGATCTT CTTCGGCATG
TGTCCGGACC CCTTGCGCCC CTATGTGAAG GAGTTTCACA AGGCGGTTCA ATTGGCGGAC
TACCCGCGTA AGCTCGCCAG CCTCAACCTC GACCTGGCGT TGGCACCGTT GGAGCAGAAC
CTGTTCAACG ACTGCAAGAG CAACCTGCGC TTGCTGGAGT ACGGTGCGTG TGGTTTCCCG
GTGATCTGCA GCGACACCAA GGCCTACGCC GGCTACCTGC CATGTACCCG GGTCAAGGAC
AACACCACCG AGCAATGGCT GGACGCGATT CGCATGCACC TGGCTGACCC GCAGGCCAGT
TACCGTCAGG GTGATGCGCT GCGCGAGGAA GTGCTGCGTG ACTACATGCT GATGCCGCAC
CATTTGCAGC ATTGGGCCAA CGCCTGGTTG GCAGACTGA
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| Protein sequence | MSEQPLVSIA IPAFNADFFQ ATLVSALGQD YPNLEVVICD DSAGVEIEAI CQALGKGTAV
PVRYTRNPVR LGFARNLQAC LEQANGALVK FLCDDDLLLD SCISRQAQVL TQWPQLSMVI
GQRLLWSADD ILLPSRALNS VIAPQSAVLV GTDLLASIAE NVPNLFGGIS HVLFRRAQVL
EYLPQLVQGG QGFAARLDLA LYACLLRRGH LASLERILSV ERIHPGRLSH HSSMTEAYRH
ETEWLQQMLA ARTGESAPAN GWVRYLPLEA YDPEADQAWE ELDIRRFHAG QVANFSQQVG
THALSFTELY AEWLACRNLS DGQLRLLPKR IEQWPAQPGI VPIVTCREGD ESALRATLDC
LAAQSYAASQ VLVLVPDCFD RVDAPGVHYL ALSGSGYAQL NQWLADTRVA DWVLLLRAGD
RLRPHALVVM AERMALRAES MCLYTDEDTF GALAPGSPIF KPDFNLDLMR SVPYVGRTLA
FKRTALLALE GFDTQFESLA PQDLLWRMVE AHGLHVVEHV AQMLVQCQWG YTDWMGEPAG
QAEAARVVEA HLRRIGVDAL VEGAAGSLVT RVTYRHEQQA SVSILIPAGA NLNALRRCVE
SLFQYTEYSQ FEVLVIANGD EPQAVTEWLA AMRGLGSDQL RVIDVQAQGR AAILNQASQH
AHGAYLLLLA PECALFEPRW LTTLMSQAQR PEVGLVGPAL CGSNGELVSS GLVLGLGGGT
AGSPFSGSFL TAEGYMGRQQ LVQNWSALSL DCLLIRRTLF EELEGLDTSA FQVALFDVDL
CLRAREKGFL SVGTPFARVM RLAGAAAVGL ADELARADRD VAYDRWLSRI ARDPAYNDNL
SLKFANFNLE PGLRSGWDPF IARAMPSVLA LPINTTAVGH YRVIQPFTEL ERAGWIQGRV
NHVSPGIIEL EREKPDVMIL QCRYMPGNIR EMAQFKRFSH ARMIYELDDY IIDPPKKNDH
ARNLPSNLAE LVAQGIGQCD RLVCSTEPLA DALSSMHQDI RVVPNMLSAA LWAGLSSQRQ
TSIRPRVGWA GGTSHRGDLE LLQEVVKALA NEVDWIFFGM CPDPLRPYVK EFHKAVQLAD
YPRKLASLNL DLALAPLEQN LFNDCKSNLR LLEYGACGFP VICSDTKAYA GYLPCTRVKD
NTTEQWLDAI RMHLADPQAS YRQGDALREE VLRDYMLMPH HLQHWANAWL AD
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