Gene Pput_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1475 
SymbolflgL 
ID5191493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1652492 
End bp1654057 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content59% 
IMG OID640585945 
Productflagellar hook-associated protein FlgL 
Protein accessionYP_001266816 
Protein GI148546714 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.649013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTT CCACTTCGCA GTTCTACAAC AGCAACAGCG CCAACTACCA GCGCAGCTTC 
TCCAACCTCG ACAAGACTCG GCAAGAGGCT TCTGACGGCA TTCGGGTGCG TCGGGGGGCT
GACGACCCGG TAGGTGCGGC ACGTCTGCTG CAACTCCAGC AGCAACAGAA CATGCTCGAC
CAGTACACCC GCAACGTTAC CAATGTGCGC AACGCCCTGG GCACCGCAGA AAGCACGCTG
AATGCGATTG GCACCATCCT GCAGCGCGTC AATGAGCTGG CCATCAGTTC GGGCAACGCC
GGTTTCACCG ATGCAGACCG CAAGGCCAAT GCGACCGAGC TGGCGTCGCT GGAGGATCAG
CTGTTCTCGT TGATGAACAG CAAGGATGAA AGCGGTGCGT ACCTGTTCTC GGGGTCCAAA
GGTGATAAAC CGCCTTATGT GCGAAACGCT GATGGTACTT ATACCTATCA GGGCGACCAG
GGCAAACTGA ACCTGCAAGT CGGTGACATG CTTACCCTGG CAGCTAACGA GACAGGCTAC
GATGCCTTCG AGCAAGCGCT CAATACAAGC CGTAGCGAAA CCAGCCTGGT GTCGCCGGCC
ACCGACGATG GCCGGGTCAA TTTGTCCAAT GGCCAGGTGA GCGGTAGCGC GACGTATAAC
GACCGCTTCC GCAGCGGCGA GCCGTACACC ATCGAGTTCA CCAGCAGCAC GCAGTTCAAG
ATCACCGATG CCGAAGGCAA GGACGTGACG CTGGAAGCCA GCCAGGGGGG CACCTTCGAC
CCCAATGGCA AGAACACTAC GATCAATTTC CGAGGTGTTG ACCTGCGCCT GGACATCACC
CTCCAGGAGG GCGATGCAGC CGACCCTGAT GCGGCCATTG CCGGTCATGT CTTTAGCCTG
AGCTCGAAGG CAGATGAAAT CAGCGGCACC CGTAGTGCAG GCAACAGCTC GTCGGCCCAA
GTGACAGGCG CGACCATCAC CGATGCGCAA AAGTACAAGT CCGCATTCCC TGAGGGTGCT
GTACTGAAGT TCACCAGCGC TACCGAGTTC GAGCTTTACG CCTCCCCCGT GAGCGCCGAC
AGCAAACCGA TTTCCAAGGG CACGCTCAGT GGCAACACGG CGACCGCCAT GGGGGTCGAG
TTCACGCTTT CGGACACGCC GAGCGCGGGC GACAGCTTTG GCATCAAGGT CGACACGCAT
CAAACTCAGA ACGTCCTCGA TACCATCAGC CAGTTGCGTG CGGCACTGGC CACCCCGGTC
GATAACGACC CTGCGGCCAG GCAGAGTTTC CTGGCATCGC TGGACTCGGC GATTGGCAAC
ATCGCCAGCG CCACCAACCA GGTCAGTTCC TCAATATCGT CGATTGGCGG CCGTGGCCAG
GCGATCGATG TACAGGTGGA AACCAATGAG GCACTGAGTG GCGAAAACGC CAAGACCCAG
AGCTCGATTC GTGAGAGCGA TCCGGCCGAG GTGATGATTC GTCTTCAGAT GCAGTCCAAC
ATGTTGCAGG CCTCGTTGCA GGCGTATGCC AAGATTGCCG GTCTCTCGCT GGTCAATTAC
ATCTGA
 
Protein sequence
MRISTSQFYN SNSANYQRSF SNLDKTRQEA SDGIRVRRGA DDPVGAARLL QLQQQQNMLD 
QYTRNVTNVR NALGTAESTL NAIGTILQRV NELAISSGNA GFTDADRKAN ATELASLEDQ
LFSLMNSKDE SGAYLFSGSK GDKPPYVRNA DGTYTYQGDQ GKLNLQVGDM LTLAANETGY
DAFEQALNTS RSETSLVSPA TDDGRVNLSN GQVSGSATYN DRFRSGEPYT IEFTSSTQFK
ITDAEGKDVT LEASQGGTFD PNGKNTTINF RGVDLRLDIT LQEGDAADPD AAIAGHVFSL
SSKADEISGT RSAGNSSSAQ VTGATITDAQ KYKSAFPEGA VLKFTSATEF ELYASPVSAD
SKPISKGTLS GNTATAMGVE FTLSDTPSAG DSFGIKVDTH QTQNVLDTIS QLRAALATPV
DNDPAARQSF LASLDSAIGN IASATNQVSS SISSIGGRGQ AIDVQVETNE ALSGENAKTQ
SSIRESDPAE VMIRLQMQSN MLQASLQAYA KIAGLSLVNY I