Gene Pput_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1469 
SymbolflgF 
ID5191032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1645841 
End bp1646581 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content61% 
IMG OID640585939 
Productflagellar basal body rod protein FlgF 
Protein accessionYP_001266810 
Protein GI148546708 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.839751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.723292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAAGA TGCTTTATGT GGCCATGACC GGGGCCAGCC AGAACGCGCT GGCGCAGAAG 
GCTCATGCCA ATAACCTGGC CAACATTTCG ACCAATGGTT TTCAGCGTGA CCTGGAGCAG
GCGCGCTCGA TGCCGGTGTT CGGTGACAGC TTTCCGGCGC GTGCCTTTGC CATGACCGAA
CGCCCAGGCA CCGACTTCAG TGAAGGCCCG ATGGTGGAAA CCGGCCGTGA CCTGGATGTG
ACTGTGAGCG GTAACGGTTT TATCGCCGTG CAGGCGCCAG ATGGCAGCGA AGCGTATGTG
CGTACCGGTA GTCTGAACAT CGACGCTCTC GGGGTATTGC GTACCGGCAA CGGTATGCCT
GTGCTTGGCA ACGGCGGCCC GATTGCCATC CCCCCCGAGC AGAAGGTCGA AGTCGGCTCC
GATGGCACCA TCAGCATCCG TTCCATGGGT GAAGACCCGC GCGTGATGGC GGAAGTCGAC
CGCATCAAGC TGGTCAACCC CGACACCAAA GGCCTGACCA AGGGCCAGGA CGGGCTGATT
CACACCTCGT CCGGCCAACC CGCGGATGCC GACGTCAACG TGCGGGTGGT TTCAGGTTTT
CTGCAGGGCA GCAACGTCAA TGCTGTCGAG GAAATGACCT CTGTACTGGC GCTGTCCCGC
CAGTTCGAAC TGCACGTCAA GATGATGAAC GCAGCCAAGG AAGGCGACGA AGCCATGGCG
CGTGTTTTGC AACTCGGCTA A
 
Protein sequence
MDKMLYVAMT GASQNALAQK AHANNLANIS TNGFQRDLEQ ARSMPVFGDS FPARAFAMTE 
RPGTDFSEGP MVETGRDLDV TVSGNGFIAV QAPDGSEAYV RTGSLNIDAL GVLRTGNGMP
VLGNGGPIAI PPEQKVEVGS DGTISIRSMG EDPRVMAEVD RIKLVNPDTK GLTKGQDGLI
HTSSGQPADA DVNVRVVSGF LQGSNVNAVE EMTSVLALSR QFELHVKMMN AAKEGDEAMA
RVLQLG