Gene Pput_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1465 
SymbolflgC 
ID5194088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1642425 
End bp1642868 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content60% 
IMG OID640585935 
Productflagellar basal body rod protein FlgC 
Protein accessionYP_001266806 
Protein GI148546704 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTT CCAGTGTCTT CAACATTGCC GGTAGCGGCA TGAGCGCACA GAACACGCGT 
CTGAACACCG TGGCGTCCAA CATCGCCAAC GCCGAGACCG TGTCTTCGAG TATCGACCAG
ACGTACCGCG CCCGTCACCC GGTGTTCGCC ACCACTTTCC AGAATGCACA GGCCGGCAGC
AGCCAGTCGC TGTTCGAAGA CCAGGGCGAG GCAGGGCAGG GCGTGCAGGT AAAAGGCATC
GTCGAAGACC AGAGCACCCT TGAAGCACGC TACGAGCCGA ACCACCCTGC GGCGAACAAG
GACGGCTACG TCTACTACCC GAACGTCAAT GTGGTCGAGG AGATGGCGGA CATGATCTCC
GCCAGTCGCG CGTTTCAGAC CAACGCCGAA CTGATGAATA CGGCCAAGAG CATGATGCAG
AAAGTGCTGA CCCTGGGGCA GTGA
 
Protein sequence
MSLSSVFNIA GSGMSAQNTR LNTVASNIAN AETVSSSIDQ TYRARHPVFA TTFQNAQAGS 
SQSLFEDQGE AGQGVQVKGI VEDQSTLEAR YEPNHPAANK DGYVYYPNVN VVEEMADMIS
ASRAFQTNAE LMNTAKSMMQ KVLTLGQ