Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1453 |
Symbol | |
ID | 5191622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1632101 |
End bp | 1633333 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640585924 |
Product | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) |
Protein accession | YP_001266795 |
Protein GI | 148546693 |
COG category | [C] Energy production and conversion |
COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.412534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGT ACGCCCCCCT GCGTTTGCAT GTGCCCGAGC CCACCGGCCG GCCAGGCTGC CAGACCGATT TTTCCTACCT GCGCCTCAAC GATGCAGGTC AAGCCCGTAA ACCCGCGATC GATGTCGATG CTGCCGACAC TGCCGACCTG TCCTACAGCC TGGTCCGCGT GCTCGACGAG CAAGGTGATG CGCAAGGCCC CTGGGCCGAA GACATCGACC CACAGATCCT TCGTCAAGGC ATGCGCGCCA TGCTCAAGAC GCGGATCTTC GACAGCCGCA TGGTGGTTGC CCAGCGCCAG AAGAAGATGT CCTTCTACAT GCAAAGCCTG GGCGAAGAAG CCATCGGCAG TGGCCAGGCG CTGGCGCTGA ACCGCACCGA CATGTGCTTC CCGACCTACC GCCAGCAAAG CATCCTGATG GCCCGCGACG TATCGCTGGT CGAGATGATC TGCCAACTGC TGTCCAACGA GCGCGACCCC CTCAAGGGCC GCCAGTTGCC GATCATGTAC TCGGTGCGCG AAGCCGGCTT CTTCACCATC AGCGGCAACC TGGCGACCCA GTTCGTGCAG GCAGTCGGCT GGGCCATGGC CTCGGCGATC AAGGGCGATA CCAAGATTGC TTCGGCGTGG ATCGGTGACG GAGCCACCGC CGAGTCGGAC TTCCACACCG CCCTCACCTT TGCCCACGTT TACCGCGCCC CGGTGATCCT CAATGTGGTC AACAACCAGT GGGCGATTTC TACCTTCCAG GCCATCGCCG GTGGCGAGTC GACCACCTTC GCCGGCCGTG GCGTGGGCTG CGGCATTGCC TCGCTGCGGG TTGACGGCAA CGACTTCGTC GCCGTGTACG CCGCCTCGCG CTGGGCTGCC GAGCGCGCCC GCCGCGGCCT GGGCCCAAGC CTGATCGAGT GGGTCACCTA CCGTGCCGGC CCGCACTCGA CGTCGGACGA CCCCTCCAAG TACCGCCCTG CCGATGACTG GAGCCACTTC CCGCTGGGTG ACCCGATCGC CCGCCTGAAG CAGCACCTGA TCAAGATCGG CCACTGGTCC GAAGAAGAAC ACCAAGCCGT CACGGCCGAG CTCGAAGCTG CGGTGATTGC CGCACAGAAA GAAGCCGAGC AGTACGGCAC CCTGGCTAAC GGGCACATCC CGAGCGCCGC CTCGATGTTC GAGGATGTGT ACAAGGAGAT GCCCGAACAC CTGCGCCGTC AACGCCAGGA ACTGGGGGTT TGA
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Protein sequence | MNEYAPLRLH VPEPTGRPGC QTDFSYLRLN DAGQARKPAI DVDAADTADL SYSLVRVLDE QGDAQGPWAE DIDPQILRQG MRAMLKTRIF DSRMVVAQRQ KKMSFYMQSL GEEAIGSGQA LALNRTDMCF PTYRQQSILM ARDVSLVEMI CQLLSNERDP LKGRQLPIMY SVREAGFFTI SGNLATQFVQ AVGWAMASAI KGDTKIASAW IGDGATAESD FHTALTFAHV YRAPVILNVV NNQWAISTFQ AIAGGESTTF AGRGVGCGIA SLRVDGNDFV AVYAASRWAA ERARRGLGPS LIEWVTYRAG PHSTSDDPSK YRPADDWSHF PLGDPIARLK QHLIKIGHWS EEEHQAVTAE LEAAVIAAQK EAEQYGTLAN GHIPSAASMF EDVYKEMPEH LRRQRQELGV
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