| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1449 |
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| Symbol | |
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| ID | 5191839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1627178 |
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| End bp | 1628176 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585920 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001266791 |
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| Protein GI | 148546689 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAG AAACCCGGCC GGTACCTGCC GGCTTCAGTG AACAGCAATT GCACACCTTG
TTCGATTTGA TCAGTGATGG CATCTGGGAC TGGAATGCCA ATACCGGCTA CGTTTATCGC
AACCCGGGCT GGTACAGCAT GCTGGGTTAT GCCAGCCACT CCATGGCCAA CTCGGTATTT
ACCTGGGAAA GCGTGATCCA TCCCGAAGAC TACCCCCGGG TAATGGCCCA TTTCGAGGCC
TATATCAATC AGCGCAACGA GCGCTACCGC ATTGAATACC GTTGCCGTTG TCAGGACGGC
AGCTACATCT GGATCGAAGA CAGCGGCTAC GTCATCGCGC ATAACGAGGA CGGTTCCGTG
GCACGCATGC TGGGTGCGCA TCGCAATATC GACGCTGGCA AGCGCTTGGT GACTCAACTG
GAACAGAAGA ACCAGTCGCT GGAATTTCAG GTGGCCGAAC GCACCCGTGA GTTGTCCTGG
GTGAACCAGC AGTTGCAGCG GCAACTGGAC GAAAACCGTG AATTGGCCGA ACGCGATGCG
TTGACCCGTG TCGCCAACCG TTACCGGCTG GAGAGCGCGT TGCAGCGGGA GTGCCAGCGC
GCCCAGCGCT TCCGCCAGCC GTTGTCGCTG ATCGCCATGG ACATGGATGA TTTCAAACCG
ATCAATGACC GCTACGGTCA CGCCCGTGGC GATGCGGCGC TGGTTCGGGT GGCCGAAAGC
CTGCGCACCT GCTTGCGCGA ACTGGACCTG CTGGCGCGGT GGGGCGGCGA CGAGTTCGTC
ATCGTGCTGC CGCAGACCGC GCTGGGGGAG GCGCTGGATG TGGCGGCGCG CTTGCGTCAG
GTGCTGGAGC AGGTGGAGCC GGTGGGTGAT TGCCGGCTGA CCATGAGCTA TGGCGTGGTG
CAATGGCTGG AAGGGGAGGA CCAGCACGCG CTGCTGGCGC GTGCCGACAA GGCGCTCTAC
AGGGCCAAGG GGACAGGCAA GAACGCAATT GCCGAGTAG
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| Protein sequence | MSQETRPVPA GFSEQQLHTL FDLISDGIWD WNANTGYVYR NPGWYSMLGY ASHSMANSVF
TWESVIHPED YPRVMAHFEA YINQRNERYR IEYRCRCQDG SYIWIEDSGY VIAHNEDGSV
ARMLGAHRNI DAGKRLVTQL EQKNQSLEFQ VAERTRELSW VNQQLQRQLD ENRELAERDA
LTRVANRYRL ESALQRECQR AQRFRQPLSL IAMDMDDFKP INDRYGHARG DAALVRVAES
LRTCLRELDL LARWGGDEFV IVLPQTALGE ALDVAARLRQ VLEQVEPVGD CRLTMSYGVV
QWLEGEDQHA LLARADKALY RAKGTGKNAI AE
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