| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1447 |
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| Symbol | |
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| ID | 5191892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1624748 |
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| End bp | 1626130 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585918 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001266789 |
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| Protein GI | 148546687 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.302331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCAC ACGGTTTGAA GCAAAGCCTC AAGCAGCGGC ATATCACCAT GATCGCGCTG
GGTGGGGTGA TCGGTGCAGG GCTGTTCATG GGCTCGGGCT CACTGATCGC ATCGGCAGGG
CCCGCGGCCA TACTGTCGTA TTTCATTGGT GGCCTGGTGG TCACCCTGGT CATGTTCATG
CTGGGCGAAA TGGCCTGCCG CAACCCGGAT GCAGGGTCGT TCTCGACCTA CGCCAACACC
TACCTCGGGG ACTGGGCAGG GTTTACGGTC GGCTGGCTGT ACTGGTTCAA GTCGATGATG
ACCATCACCC TGGAAGCGGT ACTGCTGGGC GCCATCCTGC ATGACTTCCT ACCCTGGCTG
CCGATCTGGG CAGGTGCCTT CCTGATGCTG GTGACACTCA TGGCCAGCAA CGCCTACTCG
GTGCGTTCGT TTGCCGAAGT CGAGTATTGG CTGGCCGCGA TGAAGGTCGC CACCATCCTC
ATCTTCATGG TGCTGGGCGT CTCGATCCTG CTCGGCCTGC ACAGTGAGAT TCCCGCCCCC
GGCCTGATCA ACCTCACCGC CCATGACGGC TTCATGCCCA ACGGCCTGTC ACCGGTGATG
GCCGGCGTTA TCGTGGTGAT TTTCTCCCTG GGCGGCAGCG AAATTGCCGC TGTGGCCGCG
GGTGAGTCAG AGAACCCGCG ACAGAACGTG ATCCGCGCGA TCAAGAGCGT GATCCTGCGG
GTGATGCTGT TCTACGTAGG CTCTGTGTCG ATCCTGATCC TTTGCCTGCC CTGGACCGAC
AAGGCCAACC TGGCCTCGCC CTATGTTTCG CTGTTCAGCC TGGCCGGGTT CGGTGGTGCT
GCAGTGGCCA TGAAACTGGT GCTGTTCGTC TCGTTCATGT CGGTGATGAA CTCGTTCATG
TTCTCCAACT CGCGCATGCT GTTCTCGCTG AGCCAGCGCG GTCACGCGCC CAAGCTGTTC
TCACGCACCA GTGCCAAGGG CGTACCGATC AATGCACTGC TGCTGAGCCT GTCGATCTGC
ACGATGATCC TGACCGTACA CTTTGTCAGT GGCGGCGACC TGTTCATGAC CTTGGCCAAG
AGTACCGGCA GCCTGGTCAT GGTCGTATGG ATCTTCATCA TCATCGCCCA CGTGGCGATG
CGCAGGAAAA CCCGCCACGA AGCGGTCGCC CCAAACGCCT TCCGTGCCTG GCTGTTCCCC
TACACCAATA TCATTGCGCT GTTCGCCTTG CTGGCAGTCA TCGGCACCCA GGCGTTCGAC
CCGGCATCGC GTTTCCAATT CTGGTTCACG GTGCTGACGG TACTGCTGGT GGTGGCGGGG
TACTTCCTGA TGCGTCAGCG GCTGGCCCCA AGCGCGGCGT TATGCCACGA ACGTGATGCA
TGA
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| Protein sequence | MQSHGLKQSL KQRHITMIAL GGVIGAGLFM GSGSLIASAG PAAILSYFIG GLVVTLVMFM
LGEMACRNPD AGSFSTYANT YLGDWAGFTV GWLYWFKSMM TITLEAVLLG AILHDFLPWL
PIWAGAFLML VTLMASNAYS VRSFAEVEYW LAAMKVATIL IFMVLGVSIL LGLHSEIPAP
GLINLTAHDG FMPNGLSPVM AGVIVVIFSL GGSEIAAVAA GESENPRQNV IRAIKSVILR
VMLFYVGSVS ILILCLPWTD KANLASPYVS LFSLAGFGGA AVAMKLVLFV SFMSVMNSFM
FSNSRMLFSL SQRGHAPKLF SRTSAKGVPI NALLLSLSIC TMILTVHFVS GGDLFMTLAK
STGSLVMVVW IFIIIAHVAM RRKTRHEAVA PNAFRAWLFP YTNIIALFAL LAVIGTQAFD
PASRFQFWFT VLTVLLVVAG YFLMRQRLAP SAALCHERDA
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