Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1443 |
Symbol | |
ID | 5195301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1620283 |
End bp | 1620471 |
Gene Length | 189 bp |
Protein Length | 62 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640585908 |
Product | carbon storage regulator |
Protein accession | YP_001266785 |
Protein GI | 148546683 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0139984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.7008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGATTC TGACTCGTCG GTGCGCCGAG AGCCTGATCA TTGGAGACGG CGAGATCACC GTGACGGTGC TTGGCGTCAA AGGCAACCAG GTGCGTATTG GCGTGAGCGC CCCGAAAGAA GTGGCAGTTC ACCGCGAGGA AATCTACCTG CGGATCAAGA AGGAGAAGGA TGAAGAGCCA AGCCTTTAA
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Protein sequence | MLILTRRCAE SLIIGDGEIT VTVLGVKGNQ VRIGVSAPKE VAVHREEIYL RIKKEKDEEP SL
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