| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1441 |
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| Symbol | alaS |
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| ID | 5194817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1616085 |
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| End bp | 1618778 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585906 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001266783 |
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| Protein GI | 148546681 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0440336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCCT TTGCCGTCGT TTCGTCGACG CGTTTGCCCA ACAGGGCCGC CGTTTCCGTG
GAAGAACCTA TGAAAAGCGC AGAAATCCGT GAAGCCTTCC TTCGCTTCTT CGAAGAGCAG
GGACATACCC GAGTCGCCTC CAGTTCGCTG ATCCCGAACA ACGACCCGAC CCTGCTGTTC
ACCAACGCAG GCATGAACCA GTTCAAGGAC TGCTTCCTCG GTGCGGAGAA GCGCGCCTAC
ACGCGTGCTG TCAGCAGCCA GAAGTGCGTG CGTGCCGGTG GCAAGCACAA CGACCTGGAA
AACGTCGGTT ACACCGCGCG TCACCACACC TTCTTCGAAA TGCTGGGCAA CTTCAGCTTC
GGCGACTATT TCAAGCGCGA TGCCATTACC TTCGCCTGGA CCTTCCTGAC GTCTGAGCAG
TGGCTGAACC TGCCCAAGGA AAAGCTCTGG GTCACCGTCT ACGCCACCGA CGACGAAGCC
TACGACATCT GGACCAAGGA AGTCGGCGTG CCGGCCGAGC GCATGGTGCG CATCGGCGAT
AACAAGGGCG CCCCGTACGC CTCCGACAAC TTCTGGACCA TGGGCGATAC CGGCCCGTGC
GGCCCGTGCA CCGAGATTTT CTACGATCAC GGCCCGGATA TCTGGGGTGG CCCACCTGGT
TCGCCAGAAG AAGACGGTGA CCGCTACATC GAGATCTGGA ACAACGTCTT CATGCAGTTC
AACCGCACAG CCGACGGTGT GTTGCACCCG CTGCCAGCGC CGTCGGTGGA CACCGGCATG
GGCCTGGAGC GCGTCAGCGC CGTGCTGCAG CACGTGCATT CGAACTACGA GATCGACCTG
TTCCAGAACC TGCTGGCTGC CGCAGCCAAG GCCATCGGTT GCAGCAATGA CGGCCAGGCC
TCGCTGAAAG TGGTCGCCGA CCACATCCGT TCGTGCGGCT TCCTGATTGC CGACGGCGTG
CTGCCGTCCA ACGAGGGCCG TGGCTACGTG CTGCGCCGCA TCATTCGCCG CGCTTGCCGT
CACGGCAACA AGCTGGGCGC CAAGGGCAGC TTCTTCTACC AGATCGTTGC CGCACTGGCC
GCTGAAATGG GCGAAGCCTT CCCGGAGTTG AAGAGCCAGC AAGCGCACAT CGAGCGCGTG
CTCAAGGCCG AAGAAGAGCA GTTCGCCAAG ACCCTGGAGC AGGGCCTGCG CATCCTCGAG
CAAGACCTGG CCCAACTGAA AGGCGACGTG GTACCGGGCG ACGTGGTGTT CAAGCTGTAC
GACACCTATG GCTTCCCGAT GGACCTGACT GCCGACATCG CCCGTGAGCG TGAGCTGACT
ATCGACGAAG CCGGCTTTGA GCGTGAAATG GACGCCCAGC GTGAGCGTGC CCGTTCCGCC
AGCGCCTTCG GCATGGATTA CAACAGCCTG GTCAAGGTCG ACAGCGCCAC CGAGTTCCTC
GGTTACGACA CCACCGAGGG CCAGGGCAAG ATCATCGCCC TCTACAAGGA TGGCCAATCC
GTTGACCAGC TGGGTGAAGG CGAGCAGGGC GTTGTGGTGC TCGACCGCAC GCCGTTCTAC
GCCGAGTCCG GTGGCCAGGT TGGTGACAGC GGCTTCCTGC AGGCGGGTGC TGCACGCTTC
GACGTGCGTG ATACCACCAA GACCGGCGGC GCCTTCCTGC ACCACGGCGT GGTCGCCAGC
GGTGCGCTGC TGATCGGTTC GCCCGTCGAG GCCAAGGTCG ATGCCGACGT ACAGCACGCC
ACCTCGTTGA ATCACTCCGC CACCCACCTG CTGCACGAAG CATTGCGCCA GGTACTGGGC
GAGCATGTAC AGCAGAAGGG TTCGCTGGTC GACAGCCAGC GCCTGCGTTT CGACTTCAGC
CACTTCGAAG CGGTGAAGCC GGAGCAGATC AAGCAGCTGG AAGACATCGT CAACCGCGAG
ATTCGCAAGA ACACCCCGGT TGAAACCGAA CTGACCGACA TCGAAACTGC CAAGGCCAAA
GGCGCAATGG CGCTGTTCGG CGAGAAATAC GGCGACACCG TGCGTGTGCT GAGCATGGGT
GGTGATTTTT CGGTGGAATT GTGCGGCGGT ATCCACGCCA AGCGCACCGG TGACATCAGC
CTGTTCAAGA TCATCAGCGA AGGCGGCGTA GCCTCTGGCG TGCGCCGTAT CGAAGCCGTA
ACCGGTGCCG CTGCGCTGGC TTACCTGAAC GCTGCCGAAG AGCAGGTCAA GGAAGCCGCA
CAACTGGTCA AGGGTAACCG CGACAACCTG ATCGACAAGC TGTCGGCTGT GCTTGAGCGC
AACCGCCAGC TGGAGAAGCA GCTGGAACAG CTGCAGGCCA AGGCCGCCAG CGCCGCCGGG
GACGATCTCT CCAACGCGGC CGTTGAGGTC AAGGGTGCCA AGGTCCTCGC CGCCCGCCTG
GATGGGCAGG ATGGCAAGGC CCTGCTGGCC CTGGTCGATC AGCTGAAGAA CAAGCTCGGC
CACGCAGTGA TCCTGCTGGG CAGCGAGCAT GAGGGCAAGG TTGTGCTGGT GGCCGGCGTG
ACCAAGGACC TCTCCAGCCA ACTCAAGGCT GGCGATCTGA TGAAACAAGC CGCTGCGGCG
GTGGGTGGCA AGGGCGGCGG CCGTCCGGAC ATGGCCCAGG GTGGTGGCGT CGACGTCGCT
GCCCTGGACC AGGCCCTGGC GCTGGCCGTG CCATTCGCAG AGCAGGGACT TTGA
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| Protein sequence | MRPFAVVSST RLPNRAAVSV EEPMKSAEIR EAFLRFFEEQ GHTRVASSSL IPNNDPTLLF
TNAGMNQFKD CFLGAEKRAY TRAVSSQKCV RAGGKHNDLE NVGYTARHHT FFEMLGNFSF
GDYFKRDAIT FAWTFLTSEQ WLNLPKEKLW VTVYATDDEA YDIWTKEVGV PAERMVRIGD
NKGAPYASDN FWTMGDTGPC GPCTEIFYDH GPDIWGGPPG SPEEDGDRYI EIWNNVFMQF
NRTADGVLHP LPAPSVDTGM GLERVSAVLQ HVHSNYEIDL FQNLLAAAAK AIGCSNDGQA
SLKVVADHIR SCGFLIADGV LPSNEGRGYV LRRIIRRACR HGNKLGAKGS FFYQIVAALA
AEMGEAFPEL KSQQAHIERV LKAEEEQFAK TLEQGLRILE QDLAQLKGDV VPGDVVFKLY
DTYGFPMDLT ADIARERELT IDEAGFEREM DAQRERARSA SAFGMDYNSL VKVDSATEFL
GYDTTEGQGK IIALYKDGQS VDQLGEGEQG VVVLDRTPFY AESGGQVGDS GFLQAGAARF
DVRDTTKTGG AFLHHGVVAS GALLIGSPVE AKVDADVQHA TSLNHSATHL LHEALRQVLG
EHVQQKGSLV DSQRLRFDFS HFEAVKPEQI KQLEDIVNRE IRKNTPVETE LTDIETAKAK
GAMALFGEKY GDTVRVLSMG GDFSVELCGG IHAKRTGDIS LFKIISEGGV ASGVRRIEAV
TGAAALAYLN AAEEQVKEAA QLVKGNRDNL IDKLSAVLER NRQLEKQLEQ LQAKAASAAG
DDLSNAAVEV KGAKVLAARL DGQDGKALLA LVDQLKNKLG HAVILLGSEH EGKVVLVAGV
TKDLSSQLKA GDLMKQAAAA VGGKGGGRPD MAQGGGVDVA ALDQALALAV PFAEQGL
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