| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1440 |
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| Symbol | |
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| ID | 5194248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1614762 |
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| End bp | 1615769 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585905 |
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| Product | succinylglutamate desuccinylase |
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| Protein accession | YP_001266782 |
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| Protein GI | 148546680 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2988] Succinylglutamate desuccinylase |
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| TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.104611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCCC TTGGCAAATT GCTTGAGCTG ACCCTCACCG CTCACGAACC GGCTGAGAAG
ACCCAAGTGA CACCCGGGGG CGCGCGTTTG CGATGGCTGG GGGAGGGCGC GCTCGAAGTG
CGTCCGGCCG AAAGCGAAGA TTGCGGGCTG GACTTGCTGT TGTCCGCCGG CATTCATGGC
AACGAAACAG CGCCGATCGA ATTGCTCGAA CGGCTGCTGC ACGGCGTGGC CAACGGCAAG
ATCAAACCCA GGGCACGGGT GCTGTTCCTG TTCGGCAACC CGGCGGCGAT CCGCAAGGGC
GAGCGCTTTA TCGAACAGGA CATCAACCGC TTGTTCAATG GTCGCCATGA GCTGTCCAGC
GGGTTCGAAG CACTGCGTGC TGCCGAGCTT GAACAGTTCG CCCGGGTGTT CTTCAGCAAG
CCGGGGCGCA ACCGCCTGCA TTACGACCTG CATACTGCCA TCCGCGGTTC GAAGATCGAG
CAATTCGCCT TGTACCCTTA TAAAGAGGGG CGCAAGCACT CCCGTCGTGA GCTGGCGCGC
CTGGCGGCGG CAGGTATGGA AGCGGTGCTG CTGCAAAGCA AGTCGTCCAT CACCTTCAGT
GCTTTCACCT ACGAACAGCT TGAGGCTGAA GCTTTCACCC TGGAGTTGGG CAAGGCCCGC
CCGTTCGGCC AGAACGAGCA GGTGAACCTC GACAAGCTCG AAGAGCGGCT GATCCGCATC
ATTGAGGCTA CCGAGCCCGA AAACGAAAGC TCGCTGGATG GCCTGCAGCT GTTCAGTGTT
TCCCGCGAAA TCATCAAGCA CAGCGACAGC TTCCACCTGC ACCTGCCGGC GGACATCGAA
AACTTCTCCG AGCTGAGCAA GGGTTACCTG CTGGCTGAAG ACCTGGCCGA GATGCGCTGG
GTAGTCGAGG AGGAGGGCGC GCGCATCATC TTCCCCAACC CCAAGGTCAA GAACGGCTTG
CGCGCCGGCA TTCTGATCGT GCCGGATTCG GGGCAGCGAC TGGGGTGA
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| Protein sequence | MLALGKLLEL TLTAHEPAEK TQVTPGGARL RWLGEGALEV RPAESEDCGL DLLLSAGIHG
NETAPIELLE RLLHGVANGK IKPRARVLFL FGNPAAIRKG ERFIEQDINR LFNGRHELSS
GFEALRAAEL EQFARVFFSK PGRNRLHYDL HTAIRGSKIE QFALYPYKEG RKHSRRELAR
LAAAGMEAVL LQSKSSITFS AFTYEQLEAE AFTLELGKAR PFGQNEQVNL DKLEERLIRI
IEATEPENES SLDGLQLFSV SREIIKHSDS FHLHLPADIE NFSELSKGYL LAEDLAEMRW
VVEEEGARII FPNPKVKNGL RAGILIVPDS GQRLG
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