| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1434 |
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| Symbol | argD |
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| ID | 5192083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1608115 |
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| End bp | 1609335 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585899 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_001266776 |
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| Protein GI | 148546674 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.845656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGTTG AGCAAGCCCC GGTGCAACGT GCCGATTTCG ACCAGGTGAT GGTCCCCAAC
TATTCTCCGG CGGCCTTCAT TCCTGTGCGA GGCGAGGGTT CCCGCGTCTG GGACCAGTCG
GGTCGCGAGT TGATCGACTT TGCCGGCGGC ATCGCGGTCA ATGCCCTGGG CCACTGCCAC
CCGGCACTGG TCAAGGCCCT GACTGAACAG GCCAACACCC TCTGGCACGT CTCCAACGTG
TTCACCAACG AGCCGGCCCT GCGCCTGGCC CACAAGCTGG TGGACGCCAC CTTTGCCGAC
CGCGCGTTCT TCTGCAACTC CGGCGCCGAG TCCAACGAGG CCGCTTTCAA GCTGGCCCGT
CGTGTGGCGC ATGACCGCTT CGGTCCGCAA AAGCACGAAA TCATCGCCAC CGTGAACAGC
TTCCACGGTC GCACCCTGTT TACCGTCAGC GTGGGTGGCC AGCCGAAGTA CTCCGATGGC
TTTGGCCCGA AGATCACCGG TATCAGCCAT GTGCCGTACA ACGACCTGGA AGCGTTGAAG
GCACAGATTT CCGACAAGAC CTGCGCCGTG GTGATCGAGC CGATCCAGGG CGAGAGCGGC
GTGGTTCCGG CCGACAAGGC CTACCTGGAA GGCGCGCGCA AGCTGTGTGA TGAGCACAAT
GCGCTGCTGA TCTTCGACGA AGTGCAGACT GGCGTGGGCC GTACCGGCTC GCTGTATGCC
TACCAGCACT ACGGCGTGAC CCCGGACATT CTGACCAGTG CCAAGAGCCT GGGCGGCGGC
TTCCCGATTG GCGCCATGCT GACCACCACC GAGCTGGCCA AGCACCTGGC CGTTGGCACC
CACGGCACCA CCTATGGCGG CAACCCGCTG GGTTGCGCCG TGGCCTGCGC GGTGCTGGAT
GTGGTCAACA CCCCGGAAAC CCTGGCCGGT ATCAAGGCAA AGCACGAGCG CTTCAAAACC
CGCCTGGAGC AGATCGGCCA GCAGTACAAC CTGTTCAGCC AGGTGCGTGG CGTCGGCTTG
CTGCTGGGCT GTGTCTTGAC CGAGGCCTGG CAAGGCAAGG CCAAGGACGT GCTCAATGCT
GCCGAGAAAG AAGGCGTGAT GGTGCTGCAG GCCGGCCCGG ACGTGGTCCG CTTCGCGCCA
AGCCTGGTGG TTGAAGATGC TGACATCGAC GAAGGCCTGG ACCGCTTCGA ACGCGCTGTG
GCCACACTGA CCAAAGGCTG A
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| Protein sequence | MSVEQAPVQR ADFDQVMVPN YSPAAFIPVR GEGSRVWDQS GRELIDFAGG IAVNALGHCH
PALVKALTEQ ANTLWHVSNV FTNEPALRLA HKLVDATFAD RAFFCNSGAE SNEAAFKLAR
RVAHDRFGPQ KHEIIATVNS FHGRTLFTVS VGGQPKYSDG FGPKITGISH VPYNDLEALK
AQISDKTCAV VIEPIQGESG VVPADKAYLE GARKLCDEHN ALLIFDEVQT GVGRTGSLYA
YQHYGVTPDI LTSAKSLGGG FPIGAMLTTT ELAKHLAVGT HGTTYGGNPL GCAVACAVLD
VVNTPETLAG IKAKHERFKT RLEQIGQQYN LFSQVRGVGL LLGCVLTEAW QGKAKDVLNA
AEKEGVMVLQ AGPDVVRFAP SLVVEDADID EGLDRFERAV ATLTKG
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