| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1433 |
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| Symbol | |
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| ID | 5192082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1606762 |
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| End bp | 1607742 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585898 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001266775 |
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| Protein GI | 148546673 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.392956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.582162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC AGCGAATCGG TTTTCTCATC TGGCCCAGCA CCAGGCCTTT GACCCTGGCG
TTGGCCGAGG AAGTGTTGCT GGTGGCGCAG CGGGTGCATC CGGATGTGGT TTACGAGTTG
GTCTTCCTGC AGGCCGAGCC TGCGCAGGAA GGCGCCTGGC GGCTGCCGGG CGAGCCGTGG
ACCGGCCGCC TGGAGGGCTG CCACAAGCTC TTTCTGCTGG CCGACGAGCC GCCTGCGGCG
ATGGGGGCTG CCTTTTCAGC GGCGCTCAAG CAACTGGCGC GCAGTGGTTG CCTGATCGGT
GGCTTGTCGG CCGGTGTGTA TCCGCTGGCC ATGCTGGGCC TGCTCGATGG GTACCGGGCA
GCCGTGCACT GGCGCTGGCA GGATGACTTT GCCGAACGCT TCCCCAAGGT GATTGCCACC
AGCCACCTGT TCGACTGGGA TCGCGACCGA CTGACCGCCT GCGGCGGTAT GGCCGTGACC
GACCTGCTGC TGGCGGTGCT GGCGCGCGAT CACGGGGCGG AGCTGGCCGG GGCGGTGTCG
GAAGAGCTGG TGGTAGAGCG CATCCGCGAG GGTGGCGAGC GCCAGCGTAT TCCGCTGCAG
AACCGCCTGG GCTCGAGTCA CCCCAAGCTG ACTCAGGCCG TTTTGCTGAT GGAAGCCAAC
ATCGAAGAGC CGCTGACCAC CGACGAAATC GCCCAGCATG TGTGTGTGTC ACGTCGGCAG
TTGGAGCGTA TCTTCAAGCA GTACCTGAAC CGTGTACCCA GCCAGTACTA CCTGGAGTTG
CGGTTGAACA AGGCGCGGCA GATGCTGATG CAGACCAGCA AGTCGATCAT CCAGATCGGG
CTGTCCTGTG GCTTCTCCTC GGGGCCGCAT TTTTCCAGTG CCTACCGTAA CTTCTTTGGT
GCAACGCCGC GAGAAGACCG GAACCAGCGT CGCAGCAGCA GCCCGTTTGA ATTGAGCTCG
GCGCCGGCTG AAAAGGGCTG A
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| Protein sequence | MTTQRIGFLI WPSTRPLTLA LAEEVLLVAQ RVHPDVVYEL VFLQAEPAQE GAWRLPGEPW
TGRLEGCHKL FLLADEPPAA MGAAFSAALK QLARSGCLIG GLSAGVYPLA MLGLLDGYRA
AVHWRWQDDF AERFPKVIAT SHLFDWDRDR LTACGGMAVT DLLLAVLARD HGAELAGAVS
EELVVERIRE GGERQRIPLQ NRLGSSHPKL TQAVLLMEAN IEEPLTTDEI AQHVCVSRRQ
LERIFKQYLN RVPSQYYLEL RLNKARQMLM QTSKSIIQIG LSCGFSSGPH FSSAYRNFFG
ATPREDRNQR RSSSPFELSS APAEKG
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